Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0376 ATGCCCTTGCCTTCCTATAAAACGCATCCGCATCCGAACCTGAATCCTGAATCCTATCACAACACTAACACAGATTTTGATTTGATTCGATTCGATTCAGTCGAGGTTTTAAGCAGCAGCAAGATGTCTGGGCGTGGAAAGGGAGGAAAGGGATTGGGAAAAGGAGGAGCAAAACGACATCGTAAGGTTCTCCGCGACAACATTCAGGGAATTACGAAGCCAGCGATTCGTCGTTTGGCTCGCAGGGGTGGCGTGAAGCGTATCAGCGGTTTGATCTACGAGGAGACTCGCGGTGTTCTCAAGATCTTCTTGGAGAATGTCATCCGTGACGCCGTTACTTACACGGAGCACGCTAGGAGGAAGACCGTTACGGCTATGGACGTTGTTTATGCGCTTAAGAGGCAGGGAAGGACCCTCTACGGATTTGGTGGTTAG 435 0.5011 MPLPSYKTHPHPNLNPESYHNTNTDFDLIRFDSVEVLSSSKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0376 144 CDD H4 59 142 IPR001951 GO:0003677|GO:0030527
Gso15g0376 144 PANTHER HISTONE H4 30 144 - -
Gso15g0376 144 MobiDBLite consensus disorder prediction 1 20 - -
Gso15g0376 144 Pfam Centromere kinetochore component CENP-T histone fold 80 137 IPR035425 -
Gso15g0376 144 PRINTS Histone H4 signature 46 57 IPR001951 GO:0003677|GO:0030527
Gso15g0376 144 PRINTS Histone H4 signature 61 80 IPR001951 GO:0003677|GO:0030527
Gso15g0376 144 PRINTS Histone H4 signature 81 101 IPR001951 GO:0003677|GO:0030527
Gso15g0376 144 PRINTS Histone H4 signature 103 117 IPR001951 GO:0003677|GO:0030527
Gso15g0376 144 PRINTS Histone H4 signature 118 130 IPR001951 GO:0003677|GO:0030527
Gso15g0376 144 PRINTS Histone H4 signature 130 141 IPR001951 GO:0003677|GO:0030527
Gso15g0376 144 PANTHER HISTONE H4 30 144 - -
Gso15g0376 144 SMART h44 57 131 IPR001951 GO:0003677|GO:0030527
Gso15g0376 144 MobiDBLite consensus disorder prediction 40 60 - -
Gso15g0376 144 ProSitePatterns Histone H4 signature. 56 60 IPR019809 GO:0000786|GO:0003677
Gso15g0376 144 Gene3D Histone, subunit A 43 144 IPR009072 GO:0046982
Gso15g0376 144 SUPERFAMILY Histone-fold 15 141 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0376 Gso-Chr15 3393560 3394362 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0376 K11254 - jre:109006786 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0376 15 3393560 3394362 Gso12g0610 12 5649127 5649929 PCT
Gso12g0610 12 5649127 5649929 Gso15g0376 15 3393560 3394362 PCT