Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso15g0204 | ATGGCTGGAATTGTAGTGGTTTTTGACTTCGACAAGACCATCGTCGACTGTGACAGTGATAACTGGGTTGTTGACGAGTTGGGTTTCAATGAATTGTTCAATCGGCTCCTTCCCACAATGCCTTGGAACACTCTCATGGATAAGATGATGATGGAGCTTCATTCCCATGGAAAAACCATTGAGGACATTGTGCAAGTTCTTCAGAGGATTCCTATACACCCCAGAATAATCCACGCCATTAAAGCAGCGCATGCTTTAGGGTGTGATTTGAGGATTGTAAGCGATGCAAATACGTTCTTCATCGAAACAATTTTAAAGCACTTAAAAATAAAGGAATGCTTCTCAGAGATCAACACTAACCCGGGTTATATTAATGGAGAGGAAAGGCTACGAATTTTGCCTTACCATGACTTCAACAATTCTCCCCATGGATGCACTCTGTGTCCTCCAAACATGTGCAAGGGTGAAATCATAGAGAAAATCCAAGACTCAATATCTTCAGGAGAAAAAAAGAGGGTCATATATCTTGGGGATGGTAGTGGGGACTATTGCCCAAGCCTGAGGCTAAAAGACAAAGATTTTGTGATGCCAAGAAAGAATTTTCCTGTATGGGAGTTAATATGCAAAGACCCTTTGCTCATTAAAGCTGAAATTCATGAATGGAGCGATGGAGAAGAACTGGAACGAATTTCGCTGCAGCTAATCAACAAAATTTCTTTGGGAGAAAGTGCTCAGAACATTTCTGCTGATTGCAAGTTGGAGACTATACGAGAGCCTTTTCCTCAAGTTCTACTAGCTCACCGATAA | 807 | 0.4151 | MAGIVVVFDFDKTIVDCDSDNWVVDELGFNELFNRLLPTMPWNTLMDKMMMELHSHGKTIEDIVQVLQRIPIHPRIIHAIKAAHALGCDLRIVSDANTFFIETILKHLKIKECFSEINTNPGYINGEERLRILPYHDFNNSPHGCTLCPPNMCKGEIIEKIQDSISSGEKKRVIYLGDGSGDYCPSLRLKDKDFVMPRKNFPVWELICKDPLLIKAEIHEWSDGEELERISLQLINKISLGESAQNISADCKLETIREPFPQVLLAHR* | 269 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso15g0204 | 268 | Pfam | Putative Phosphatase | 4 | 235 | IPR016965 | GO:0016791 | |
| Gso15g0204 | 268 | SUPERFAMILY | HAD-like | 5 | 198 | IPR036412 | - | |
| Gso15g0204 | 268 | PANTHER | PHOSPHATASE, ORPHAN 1, 2 | 1 | 266 | IPR016965 | GO:0016791 | |
| Gso15g0204 | 268 | PANTHER | INORGANIC PYROPHOSPHATASE | 1 | 266 | - | - | |
| Gso15g0204 | 268 | TIGRFAM | HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB | 5 | 187 | - | - | |
| Gso15g0204 | 268 | Gene3D | - | 2 | 192 | IPR023214 | - | |
| Gso15g0204 | 268 | PIRSF | PLP_phosphatas_PHOSPHO2 | 1 | 239 | IPR016965 | GO:0016791 | |
| Gso15g0204 | 268 | TIGRFAM | DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | 4 | 199 | IPR006384 | GO:0016791 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso15g0204 | Gso-Chr15 | 1815509 | 1818042 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso15g0204 | K13248 | - | gmx:100801052 | 532.332 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso7g0100 | 7 | 899404 | 901697 | Gso15g0204 | 15 | 1815509 | 1818042 | PCT | |
| Gso8g1614 | 8 | 15794405 | 15796599 | Gso15g0204 | 15 | 1815509 | 1818042 | PCT |