Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0189 ATGTACAGAGCAGTAGCTTCACGTCTCACCCTTCCCAAGGGAAATGGGAGAACCTTGGGAGCCTCCAGAGGTTTATTCAACTGGCTTACTGGGGAATCTTCAAATCCTCTTCCTCCCCTTGACACCCCACTTAGAGGGGTTTCCCTGCCACCTTCATTGCCAGATTATGTTGAACCAAGCAAGACCAAGATCACAACTCTCCCCAATGGTCTAAAAATTGCATCAGAAACCTCACCAAACCCTGCTGCCTCAATTGGGTTATATGTTGACTGTGGTTCCCTCTATGAGACGCCATTGTCAAGCGGGGCGTCACACCTGTTAGAGAAAATGTCTTTCAAGAGCACGGCAAACCGAAGTCACTTTCGTGTTGTAAGGGAAGTGGAAGCAGTTGGTGGCAATGTAGGAGCCTCGGCCTCTCGGGAGCAAATGGGCTACACTTTTGATGCTCTAAAAACTTATGTTCCACAAATGATTGAGTTGCTGGTTGACTGCGTAAGGAACCCGGCCTTCTTAGATTGGGAGGTCAATGAAGAGCTTCGGAAGGTGAAATCAGAACTTGGAGAACTATCAAACAATCCCCAAGGCTTACTTTTGGAGGCAGTTCACTCTGCTGGTTATTCTGGAGCATTGGCTAATCCACTTTTGGCTTCTGAATCAGCACTGAACACATTAAATAGCTCCCTTTTAGAGGAATTTGTTGCTGAGAATTATACTGCATCTAGAATGGTACTTGCAGCATCTGGGGTTGAGCATGAAGAACTTTTATCTGTCGCTGAACCACTTCTCTCTGATCTACCAAGTGTTCCCTGTCCTGAAGAACCAAAATCTGAATATGTTGGTGGAGATTTCCGTCGTCAAGGTGAACCAGGGGTTGCACATGTAGCTATTGCTTTTGAAGTGCCTGGTGGCTGGAAAAAAGAGAAAGAAGCTATTGTTTTGACTGTTCTACAGATGCTTATGGGAGGAGGTGGGTCATTCTCAGCCGGAGGGCCTGGGAAAGGGATGCACTCAAGGCTGTTTCTTCGTGTCTTGAATGAACATCAACAGATTCATTCTTTTTCTGCATTCAACAGTCTCTTCAACAATACAGGGTTATTTGGCATCTATGCAAGCACGGGCTCTGATTTTGTGGCAAAAGCTGTGGATTTAGCAGCCAGAGAATTAATTGCAATTGCATCACCAGGACAAGTTTCACAGGTACAGCTTGACCGTGCTAAGGTATCCACGAAGTCTGCAGTTCTAATGAATTTGGAGTCCAGAATGATTGCATCAGAGGATATAGGAAGGCAGATATTGACTTATGGAGAAAGGAAGCCACTGGAGCAGTTCTTTAAGGCAGTAGATGGAATCACTTTGAATGATATCACTAAAATTTCTCAGAAGATTATTTCCTCACCTCTCACTATGGCATCCTATGGGGATGTATTCAATGTCCCCAGTTACGAATCCGTTAGCAGGAAGTTCCATGCAAAATGA 1476 0.4505 MYRAVASRLTLPKGNGRTLGASRGLFNWLTGESSNPLPPLDTPLRGVSLPPSLPDYVEPSKTKITTLPNGLKIASETSPNPAASIGLYVDCGSLYETPLSSGASHLLEKMSFKSTANRSHFRVVREVEAVGGNVGASASREQMGYTFDALKTYVPQMIELLVDCVRNPAFLDWEVNEELRKVKSELGELSNNPQGLLLEAVHSAGYSGALANPLLASESALNTLNSSLLEEFVAENYTASRMVLAASGVEHEELLSVAEPLLSDLPSVPCPEEPKSEYVGGDFRRQGEPGVAHVAIAFEVPGGWKKEKEAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLFLRVLNEHQQIHSFSAFNSLFNNTGLFGIYASTGSDFVAKAVDLAARELIAIASPGQVSQVQLDRAKVSTKSAVLMNLESRMIASEDIGRQILTYGERKPLEQFFKAVDGITLNDITKISQKIISSPLTMASYGDVFNVPSYESVSRKFHAK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0189 491 PANTHER METALLOPROTEASE 23 490 - -
Gso15g0189 491 Pfam Peptidase M16 inactive domain 227 406 IPR007863 -
Gso15g0189 491 Gene3D - 54 264 - -
Gso15g0189 491 ProSitePatterns Insulinase family, zinc-binding region signature. 92 115 IPR001431 GO:0004222|GO:0006508
Gso15g0189 491 SUPERFAMILY LuxS/MPP-like metallohydrolase 61 271 IPR011249 GO:0046872
Gso15g0189 491 SUPERFAMILY LuxS/MPP-like metallohydrolase 284 482 IPR011249 GO:0046872
Gso15g0189 491 Pfam Insulinase (Peptidase family M16) 73 216 IPR011765 -
Gso15g0189 491 Gene3D - 276 487 - -
Gso15g0189 491 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 23 490 IPR037715 GO:0006627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0189 Gso-Chr15 1620569 1624667 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0189 K01412 - gmx:100810996 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0189 15 1620569 1624667 Gso11g3625 11 51904867 51908485 GST
Gso15g0189 15 1620569 1624667 Gso7g0124 7 1132949 1139446 PCT
Gso15g0189 15 1620569 1624667 Gso8g1658 8 16227954 16233647 PCT
Gso7g0124 7 1132949 1139446 Gso15g0189 15 1620569 1624667 PCT
Gso8g1658 8 16227954 16233647 Gso15g0189 15 1620569 1624667 PCT