Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0157 ATGGACAAGGAAGTGGAGCTTGGTTCCCTTGAAGGTGAAATGGCCACCCAGCACATTTCACAACCACAGAAGCGCAAGGGTGGTCTTGTTACCATGCCTTTCATCATTGCAAATGAGGCACTTGCGAGGGTGGCAAGTTTGGGCCTTTTGCCCAACATGATACTGTATTTGATGGGGACCTACAGGCTTCACCTTGCCCAAGCAACCCAGATACTTCTCTGGTCCCATGCTACCAGCAATTTCACACCTGTGGTGGGTGCTTTCATTGCTGATTCTTATCTGGGTCGATTCCTCGCTGTTGGGTTGGGTTCGGCCATCACTTTTCTGGGAATGACACTGCTGTGGTTAACAGCTATGATCCCACAGGCACGGCCTCCCACTTGCAGTAGCAATAAAGCTGGAGGCTGTAAATCGGCAACAGGAGGGCAAATGGCAATCTTAATCTCTGCCCTTGCTCTCATGTCTGTTGGAAATGGTGGTCTTTCATGCTCCTTAGCATTTGGTGCAGACCAGGTGAACAGAAAAGATAACCCCAACAACAGAAGGGTCTTGGAAATATTCTTCAGCTGGTATTATGCTTCTGCTGCTATTTCTGTCATAATTGCTCTCACAGGAATAGTTTATATCCAAGATCATCTTGGATGGAAAGTGGGTTATGGAGTTCCAGCAGCACTCATGCTTTTATCTACTGTCTCCTTCCTCCTTGCCTCTCCACTTTATGTAAAGAATAAAGTAGAATCCAGCTTGTTCACAGGATTTGTACAAGTGATTGTTGTTGCCTACAAGAACAGAAAACTTCCATTACCACCAAACAACTCCCCTGAACATTACCATCATAAGAAGGAGTCAGACCTTGTCGTTCCAACCGATAAACTAAGTTTCCTGAATAGAGCCTGTGTTATCAAAGATCGGGAACAAGAAATAGCCTCGGATGGTTCAGCATCAAATCCATGGAAACTCTGCACAGTAGATCAAGTAGAGGAACTAAAAGCCATTATTAAAGTGATTCCCTTGTGGTCTACAGGGATCATGATGTCAGTTAACATTGGAGGCTCATTTGGATTGCTGCAAGCTAAGTCCCTGGACAGACACATCACCTCACACTTCCAAGTGCCACCTGGCTCTTTTAGTGTAGTCATGGTACTTACAATATTTTTATGGATAGCTCTCTATGACCGAGCCATTCTTCCTTTAGCATCAAAGATAAGAGGCAAACCGGTTAGGATCAGTGCAAAGAGAAGAATGGGACTTGGCTTGTTTTTCTCTTTTATCCACTTGGTAACTTCGGCTATTGTCGAATCCGTAAGGCGAAGGAGAGCAATCAAGGAGGGATATCTTAACAATGCCAATGGTGTGTTGCATATGTCTGCAATGTGGCTTTTCCCACAACTTTGCTTGGGTGGAATAGCTGAAGCATTCAATGCAATAGGCCAAAATGAGTTCTATTACACAGAGTTTCCTAGGACCATGTCCAGTGTTGCTGCTTCCCTTTCTGGACTGGGAATGGCTGCAGGAAACTTGGTGTCTAGTTTTGTCTTCAGCGTTGTACAAAATGCTACTTCAAGAGGGGGGAAAGAAGGTTGGGTTTTGGATAACATTAACAAGGGTCGTTATGACAAGTACTACTGGGTTATTTCTGGACTCAGTGCTCTTAATATAGTGTATTATCTAATATGCAGTTGGGCTTATGGACCTACCGTTGAGCAAGTACAAGTACGTAAGTTAGGTGAAGAAAATGGCTCAAGGGAATTAGAACCTTCAACTGAATTTAGGAATGGGAGTCAGGTTGACAAAGAATTCCAGATTAGTAAAGAAAATGGCTCAAAGGAGGAAGAAGAGTTAACTAGGTGA 1851 0.4403 MDKEVELGSLEGEMATQHISQPQKRKGGLVTMPFIIANEALARVASLGLLPNMILYLMGTYRLHLAQATQILLWSHATSNFTPVVGAFIADSYLGRFLAVGLGSAITFLGMTLLWLTAMIPQARPPTCSSNKAGGCKSATGGQMAILISALALMSVGNGGLSCSLAFGADQVNRKDNPNNRRVLEIFFSWYYASAAISVIIALTGIVYIQDHLGWKVGYGVPAALMLLSTVSFLLASPLYVKNKVESSLFTGFVQVIVVAYKNRKLPLPPNNSPEHYHHKKESDLVVPTDKLSFLNRACVIKDREQEIASDGSASNPWKLCTVDQVEELKAIIKVIPLWSTGIMMSVNIGGSFGLLQAKSLDRHITSHFQVPPGSFSVVMVLTIFLWIALYDRAILPLASKIRGKPVRISAKRRMGLGLFFSFIHLVTSAIVESVRRRRAIKEGYLNNANGVLHMSAMWLFPQLCLGGIAEAFNAIGQNEFYYTEFPRTMSSVAASLSGLGMAAGNLVSSFVFSVVQNATSRGGKEGWVLDNINKGRYDKYYWVISGLSALNIVYYLICSWAYGPTVEQVQVRKLGEENGSRELEPSTEFRNGSQVDKEFQISKENGSKEEEELTR* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0157 616 Pfam POT family 99 529 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso15g0157 616 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 86 110 IPR018456 GO:0006857|GO:0016020|GO:0022857
Gso15g0157 616 CDD MFS_NPF1_2 32 563 - -
Gso15g0157 616 Gene3D MFS general substrate transporter like domains 5 571 IPR036259 -
Gso15g0157 616 MobiDBLite consensus disorder prediction 602 616 - -
Gso15g0157 616 MobiDBLite consensus disorder prediction 586 601 - -
Gso15g0157 616 PANTHER PEPTIDE/NITRATE TRANSPORTER 16 582 - -
Gso15g0157 616 MobiDBLite consensus disorder prediction 578 616 - -
Gso15g0157 616 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 16 582 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso15g0157 616 SUPERFAMILY MFS general substrate transporter 32 560 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0157 Gso-Chr15 1323098 1326436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0157 11 585 Organic Solute Cotransporters AT1G52190 58.763 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0157 - K14638 gmx:100792940 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0157 15 1323098 1326436 Gso7g0158 7 1498535 1501650 PCT
Gso15g0157 15 1323098 1326436 Gso8g1696 8 16609679 16612708 PCT
Gso7g0158 7 1498535 1501650 Gso15g0157 15 1323098 1326436 PCT
Gso8g1696 8 16609679 16612708 Gso15g0157 15 1323098 1326436 PCT