Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0156 ATGGAGAAGGAAATGGAGGCTGCTTTAGTTCATGTGGAGACGACCCAGCAACACATGAATCCACATGTACTAAGGCGCAAGGGTGGCTTCATTACCATGCCTTTCATTATAGCAAATGAGGCACTAGCTAAGCTGGCTAGTGTTGGACTTATGCCAAACATGGTATTGTATTTGATAGGGGATTACAGGCTCCGAGTACTGAAAGCAACCAAAATTATGTTCTATTGGTTTGCCGCTACCAATTTTGCTCCTGTGATTGGTGCTTTTGTGGCTGATGCTTATTTGGGTCGCTTCCTTGCCATTGGTTTAGGTTCAATTCTCAGTTTCCTGGGGATGGCAGTGATGTGGTTAACAACCATGGTCCCAGAGGCAAGGCCATGCAGCCATTGTGAAGAATCAGCAACAACACCCCAAATGGCTATCTTACTCTCTTGCTTTGCTCTCATATCCATTGGAGGTGGGGGCATCTCATGCTCCTTAGCATTTGGTGCTGATCAACTTAACCAAAAATCCAAACCCAACAATCCGAGGGTCCTTGAGAGCTTCATAAGTTGGTACATAGCTTCTCAAGCCATTGCTGTGGTTTTTTCCTTAACCGGAATAGTTTACATCCAAGACCATTTTGGATGGAAACTGGGTTTTGGGGTCCCAGCAGCACTTATGTTCTTGTCCACTCTCATGTTCTTCCTCATTTCTTCACGTTATGTCAAGCAGAAACCACACAGCAGCTTACTCACTGGCTTTGTCCAAGTGCTTTTCGTTGCCTATAAGAACAGAAACCTTTCATTTCCACCTAAGGACTCCACTTGCATGTATCACCATAAGAAGGACTCACCCCTTGTTGCTCCAACTGATAAACTAAGGTTTCTAAACAAAGCTTGCATCATCAAAGATAGGGAACAGGATATAGCCTCTGATGGATCAGCCTCAGATAAATGGAGTCTTTGCACAATAGAGCAAGTGGAAGAACTAAAAGCCATCATTAAAGTTATTCCTCTTTGGTCTACCGGTATCATGGTGTCAGTCAGCACTAGCCAAACATCACTTTGGTTGCTCCAAGCCAAAACAATGGACAGACACATCACTTCAAGCTTCCAAATTCCAGCAGGCTCTTTCGGTGTGTTCATAATGTTGGCAGTGTGTGTAACTGCTGGTGTCTATGATCGTGTCATCCTTCCTCTAGCATCAAAAGTGAGAGGAAAACCAGTTACTATCAGCGCCAAAAAGAGAATGGGAATTGGACTGTTTTTCTCATTTTTGGACTTTGTAGCCTCAGCTGTTGTTGAGAGCATAAGGAGAAGGAAAGCAATTAGGGAGGGATATATTAATAATCCTGAGGCAGTGTTGGACATGTCTGCAATGTGGCTCATCCCACATAATATTTTGTGTGGTATAGCAGAAGCCTTTAATGCAATAGGGCAATCAGAGTTCTATTACTCTGAGTTTCCAAGCAGCATGTCAAGCATTGCTGCATCCCTATTCAGCCTAGGATCTGCTGTGGGAAACTTGGTGGCTTCTCTTATACTCAGCATTGTGGATGACATTACTTCCAGAGGGGGAAAAGAGAGCTGGGTTTCAGATAACATTAACAAGGGTCACTATGACAAGTACTATTGGCTTCTTGCCATAATGAGTGTTGTTAATATACTCTACTATTTGGTTTGCAGTTGGGCTTATGGCCCTAGTGCTGAACCAGCTTCAAAGAAGGAAGAAAGAGGGAATGGGGTTCGTGATCAACAAGAAGAGGCAATGTAA 1755 0.4365 MEKEMEAALVHVETTQQHMNPHVLRRKGGFITMPFIIANEALAKLASVGLMPNMVLYLIGDYRLRVLKATKIMFYWFAATNFAPVIGAFVADAYLGRFLAIGLGSILSFLGMAVMWLTTMVPEARPCSHCEESATTPQMAILLSCFALISIGGGGISCSLAFGADQLNQKSKPNNPRVLESFISWYIASQAIAVVFSLTGIVYIQDHFGWKLGFGVPAALMFLSTLMFFLISSRYVKQKPHSSLLTGFVQVLFVAYKNRNLSFPPKDSTCMYHHKKDSPLVAPTDKLRFLNKACIIKDREQDIASDGSASDKWSLCTIEQVEELKAIIKVIPLWSTGIMVSVSTSQTSLWLLQAKTMDRHITSSFQIPAGSFGVFIMLAVCVTAGVYDRVILPLASKVRGKPVTISAKKRMGIGLFFSFLDFVASAVVESIRRRKAIREGYINNPEAVLDMSAMWLIPHNILCGIAEAFNAIGQSEFYYSEFPSSMSSIAASLFSLGSAVGNLVASLILSIVDDITSRGGKESWVSDNINKGHYDKYYWLLAIMSVVNILYYLVCSWAYGPSAEPASKKEERGNGVRDQQEEAM* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0156 584 Gene3D MFS general substrate transporter like domains 2 565 IPR036259 -
Gso15g0156 584 MobiDBLite consensus disorder prediction 563 584 - -
Gso15g0156 584 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT 18 569 - -
Gso15g0156 584 SUPERFAMILY MFS general substrate transporter 20 558 IPR036259 -
Gso15g0156 584 Pfam POT family 99 525 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso15g0156 584 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 18 569 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso15g0156 584 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 87 111 IPR018456 GO:0006857|GO:0016020|GO:0022857
Gso15g0156 584 MobiDBLite consensus disorder prediction 565 584 - -
Gso15g0156 584 CDD MFS_NPF1_2 33 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0156 Gso-Chr15 1313403 1318725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0156 5 581 Organic Solute Cotransporters AT1G52190 57.458 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0156 - K14638 gmx:100782867 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0156 15 1313403 1318725 Gso7g0159 7 1505690 1510340 PCT
Gso15g0156 15 1313403 1318725 Gso8g1697 8 16615868 16620773 PCT
Gso7g0159 7 1505690 1510340 Gso15g0156 15 1313403 1318725 PCT
Gso8g1697 8 16615868 16620773 Gso15g0156 15 1313403 1318725 PCT