Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0108 ATGGACGCTGTTTTTCAAACCAGAGGCCTTCTTTCTCTTCCCACAAACCCCGTTAACAGAATCTCACTCTTGCACCCTTCACATGGTTTAAGGCACAGACTTTTCTCTCCAAAGCCAAAAAACCTTTCTGGGTCTTCTCTTTCCTTTAATGGGTTCCCCAAACTCTCACCAAAAGCCAATGTCTTTGCCCAAAGGGACAAAAACAAAAACTTGTTCTTGTGCAGGGCTGAGGCTGCTGCTGCTGCAGCCTCCTTTGGGGAACCAGGAAGTGAGAAGCCAAAGCTTTTGGGTATTGAAGTTGCCACCTTGAAGAAAATCGTGCCTCTGGGATTGATGTTCTTTTGCATCCTCTTCAACTACACCATCTTAAGGGACACAAAAGATGTGTTGGTTGTGACGGCCAGAGGAAGCAGTGCTGAGATCATACCGTTTCTTAAAACCTGGGTGAACCTTCCAATGGCCATTGGGTTCATGTTATTGTACACAAAGTTGGCTAATGTGTTGTCGAAGCAGGCTCTCTTCTACTCTATTATTCTTCCCTTCATTGCATTCTTTGGGGCCTTTGGTTTTGTTTTGTACCCTCTCAGCAACTATATTCACCCTGAGGCTTTTGCGGATAAGCTTCTTAACATCCTTGGCCCGCGGTTCCTTGGCCCTCTTGCAATTATGAGAATATGGAGCTTCTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTGGTGATTTCGGTGCTGTTTTGGGGGTTTGCCAATCAGATAACTACCGTTGATGAAGCAAAAAGATTTTATCCTCTATTTGGACTTGGGGCCAATGTAGCCCTTGTGTTCTCTGGTCGGACAGTGAAATACTTTTCTAATCTGCGGAGTACTTTAGGTCCTGGAGTTGATGGTTGGGCCATCTCTCTAAAAGCAATGATGAGCATAGTTGTGGGCATGGGAGTTGCAATCTGTTTCCTGTATTGGTGGGTGAACAATTATGTTCCTCTTCCTACACGTAGCAAGAAGAAGAAGGAGAAGCCCAAGATGGGAACAATGGAGAGCATAAAGTTCTTGGTGTCTTCAAAATATATAAGGGATCTTGCCACTTTAGTGGTCGCATATGGAATTAGCATTAATCTTGTTGAGGTTACATGGAAATCAAAGCTCAAAGCTCAGTTTCCTAGCCCCAACGAGTACTCATCTTTTATGGGAGACTTCTCAACTGCAACTGGAATTGCTACATTCATAATGATGCTTCTAAGTCAATTTATATTTGACAAATATGGATGGGGAGTTGGTGCCAAGATCACCCCCACCGTCCTGCTATTGACAGGAGTTGGTTTCTTTTCTCTTATATTATTTGGCGGCCCAATTGCTCCTGTTATTGCAAAGTTTGGAATGACTCCACTGCTAGCTGCTGTATATGTGGGTGCCATGCAGAACATATTCAGCAAGAGTGCTAAGTACAGTTTATTCGATCCGTGCAAGGAAATGGCCTACATACCCTTAGATGAGGATACCAAGGTCAAGGGAAAGGCAGCCATTGATGTTGTGTGCAACCCATTGGGGAAATCTGGAGGAGCTCTGATTCAGCAGTTCATGATCTTAACTTTTGGTTCACTAGCTAACTCAACCCCATACCTAGGAGGGGTCCTTCTGGTGATTGTTCTTGTCTGGTTATCAGCGGCCAAGTCGCTTGATACCCAGTTTACTGCATTGCGCCGAGAAGAAGAACTTGAGAAAGAGATGGAAAGAGCAGCAGCTGTTAAGATACCAGTGGTGGCCAAGGATGAGGATGAAAATGGTTCTCTTAAAAGTGTTCCACTGTTAAATCCAACAGCTGGTGACTCCTCAAGTATATTGAATTGA 1851 0.4435 MDAVFQTRGLLSLPTNPVNRISLLHPSHGLRHRLFSPKPKNLSGSSLSFNGFPKLSPKANVFAQRDKNKNLFLCRAEAAAAAASFGEPGSEKPKLLGIEVATLKKIVPLGLMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAIGFMLLYTKLANVLSKQALFYSIILPFIAFFGAFGFVLYPLSNYIHPEAFADKLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVDEAKRFYPLFGLGANVALVFSGRTVKYFSNLRSTLGPGVDGWAISLKAMMSIVVGMGVAICFLYWWVNNYVPLPTRSKKKKEKPKMGTMESIKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFIMMLLSQFIFDKYGWGVGAKITPTVLLLTGVGFFSLILFGGPIAPVIAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLVIVLVWLSAAKSLDTQFTALRREEELEKEMERAAAVKIPVVAKDEDENGSLKSVPLLNPTAGDSSSILN* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0108 616 TIGRFAM AAA: ADP/ATP carrier protein family 98 564 IPR004667 GO:0005471|GO:0006862|GO:0016021
Gso15g0108 616 MobiDBLite consensus disorder prediction 596 616 - -
Gso15g0108 616 Pfam TLC ATP/ADP transporter 94 564 IPR004667 GO:0005471|GO:0006862|GO:0016021
Gso15g0108 616 MobiDBLite consensus disorder prediction 600 616 - -
Gso15g0108 616 PANTHER ADP,ATP CARRIER PROTEIN 1 597 - -
Gso15g0108 616 PANTHER - 1 597 IPR004667 GO:0005471|GO:0006862|GO:0016021
Gso15g0108 616 SUPERFAMILY MFS general substrate transporter 108 557 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0108 Gso-Chr15 888342 891918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0108 1 598 Organic Solute Cotransporters AT1G80300 81.250 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0108 K03301 - gmx:100775892 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0108 15 888342 891918 Gso11g3694 11 52575369 52579103 GST
Gso15g0108 15 888342 891918 Gso8g1738 8 16997280 17001320 PCT
Gso8g1738 8 16997280 17001320 Gso15g0108 15 888342 891918 PCT