Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0102 ATGATTGTGCTCTGCTCTGCTTTGATTCTCTCTGCTCATAAAGAACCTCTTCATACTCATTGCAGTTGCAGTACGTGGGGGGTGCTTTCAACACTTTCTTCAATCAGCAAAATGAGTCATGCACATTCTCATATGGGCTCTGGTAGTAGAACCACTCGAAGAGCTTTTGAGTTTGGGAAGACACATGTAGTGAGGCCAAAAGGAAAACACCAAGCCACTATAGTTTGGCTGCATGGTCTTGGTGATAATGGTTTGAGCTCATCTCAGCTCCTGGAATCCCTTCCACTTCCAAATATAAAATGGATTTGCCCAACTGCTCCTACCCGTCCTGTGGCGATACTTGGTGGTTTTCCCTGCACTGCATGGTTTGATGTTGGAGAACTTTCAGAAGATGGTCCAGATGATTGGGAGGGTTTAGATGCCTCAGCAGCACACATTGCTAACTTGTTGTCCACAGAGCCAGCTGATGTGAAAGTTGGTATTGGAGGCTTCAGCATGGGTGCAGCAATAGCTCTGTACTCTTCAACTTGTTTTGCCATGGGAAGGTATGGAAATGGCATTCCATACCCTCTCAACTTAAGAACAGTGGTTGGACTAAGTGGTTGGCTTCCCGGATCAAGGAGCTTAAGGAACAAGATAGAAGTGTCACATGAAGCAAGAAGGCGAGCAGCTTCATTACCCATTTTGCTGTGCCATGGAATCAGTGATGATGTAGTCCTTTGCAAATACGGAGAAAAATCTGCTCAATCCTTATGTTCAGCAGGGTTTCGATATGTTGCATTCAAATCTTATGATGGGCTTGGTCATTACACAGTTCCTAGAGAAATGGATGAGGTTTGCACTTGGCTTAGTTCAAGGCTGGGACTTGAAGGTATATAG 879 0.4494 MIVLCSALILSAHKEPLHTHCSCSTWGVLSTLSSISKMSHAHSHMGSGSRTTRRAFEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEDGPDDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAIALYSSTCFAMGRYGNGIPYPLNLRTVVGLSGWLPGSRSLRNKIEVSHEARRRAASLPILLCHGISDDVVLCKYGEKSAQSLCSAGFRYVAFKSYDGLGHYTVPREMDEVCTWLSSRLGLEGI* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0102 292 Gene3D alpha/beta hydrolase 52 288 IPR029058 -
Gso15g0102 292 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 291 - -
Gso15g0102 292 Pfam Phospholipase/Carboxylesterase 61 284 IPR003140 GO:0016787
Gso15g0102 292 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 291 - -
Gso15g0102 292 SUPERFAMILY alpha/beta-Hydrolases 62 287 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0102 Gso-Chr15 810188 814401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0102 38 291 Acyl Lipid Metabolism Gene Families AT3G15650 75.000 6.64e-132 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0102 K06130 - gmx:100798395 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0102 15 810188 814401 Gso11g3701 11 52673588 52678295 GST
Gso15g0102 15 810188 814401 Gso8g1745 8 17063236 17066721 PCT
Gso8g1745 8 17063236 17066721 Gso15g0102 15 810188 814401 PCT