Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0078 ATGCATATGGGTGGTTGTCTTGGACCCTTTAAAAAGCCCCCACTAATTGCTACTGCAGATGTTCCGCCAAAAGGATTGAGGAAACAAGGTAAGGCAGCAAAGAAACCTAGCACATCAGAAGATTTCTGGATCACCAGCACGCATGATATGGACAACAGTGCTGTTCAGTCACAGGGAAGCATCTCATCAGCCAGTATAACAAACCAAGCTGCAGATCCTCATGGAGGTTCATGCAACCCCACTGAGTTTGTGAATCATGGTCTTATTCTATGGAATCAGACACGGCAAGGTTGGATAGGAAATAAACGGTCTAAGAACCAAACTGAACAGTTGCGAGAACCCAAATTGAGTTGGAATGCAACATATGAAAGTTTACTGGGGAGCAACAAGCCATTCCCTCAGCATATTCCCCTTGCGGAAATGGTTGATTTTCTTGTGGACATCTGGGAACAAGAGGGTCTGTATGACTAA 471 0.448 MHMGGCLGPFKKPPLIATADVPPKGLRKQGKAAKKPSTSEDFWITSTHDMDNSAVQSQGSISSASITNQAADPHGGSCNPTEFVNHGLILWNQTRQGWIGNKRSKNQTEQLREPKLSWNATYESLLGSNKPFPQHIPLAEMVDFLVDIWEQEGLYD* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0078 156 MobiDBLite consensus disorder prediction 54 75 - -
Gso15g0078 156 MobiDBLite consensus disorder prediction 54 78 - -
Gso15g0078 156 PANTHER DUF4050 FAMILY PROTEIN 3 156 - -
Gso15g0078 156 PANTHER OS07G0479600 PROTEIN 3 156 - -
Gso15g0078 156 Pfam Protein of unknown function (DUF4050) 115 156 IPR025124 -
Gso15g0078 156 Pfam Protein of unknown function (DUF4050) 46 114 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0078 Gso-Chr15 649146 654529 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0078 - - gmx:100500161 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0078 15 649146 654529 Gso11g3721 11 52807035 52810256 GST
Gso15g0078 15 649146 654529 Gso8g1761 8 17184347 17187255 PCT
Gso8g1761 8 17184347 17187255 Gso15g0078 15 649146 654529 PCT