Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1354 ATGCTTCTGTCGTCGATACGCAGAGGATTCACTAGTCGAGTAGGTCCCATACGAACCCTCTCTTCGCACTCCGAAATGAAAGACTTTCTGGATTACCTCGACTCCCTCAAAAATTACGAGAAATCAGGAGTTCCCAAAGGTGCCGGCACCGATTCCAGCGACGGTTTCGATCTTGGTAGAATGAGATGCCTCATGGAGCGTTTTGGTAACCCTCACTCCAAGTTCAAGGCTGTTCATATTGCTGGAACTAAGGGGAAGGCATCAACAGCTGCTTTTGTATCTAATATTCTGAGGAATGAAGGTTATTCTGTTGGTTGTTACACTAGTCCACATATCCTGACCATCCGGGAGCGCATTTTACTGGGAAAATCCGGCCATCTGGTGTCAGCGAAATTGTTGAATGATCTCTTTCGTAGGATCAAGCCCGATATTGACCAGGCAATGAAAGAGGAAAATGGTTGCATAAGCCATTTTGAGGTTTTCACTACCATGGCATTCCTCCTATTTGCTGATGAGAATGTTGACTTTGCTGTTATTGAGGCTGGGTTAGGGGGTGCACGAGATGCAACAAATATAATATCCAGCTCTGGGCTTGTTGCATCAGTCATAACCACTATAGGTGAAGAACATTTGGCAGCTCTTGGGGGTTCTTTGGAAACAATTGCAATGGCAAAGGCAGGAATCATAAAACAAGACCGCCCATTGGTGTTGGGTGGTCCATTTGTCCCTCATATTGAGCGCATTATTCGAGACAAAGCAGTAGCCATGAATTCACCTGTAGTGTCAGCATACGATACTGGAAATAAGTGTACTATGAAAAGTTTCAGCATACTCAATGGAAGGCCTTGTCAAATTTGTGATATACTGATACAAGTTGTGAAAGACATGAAAATGTCCTGTAAGTTACATGATGTGAAGTTGCAAATGCTTGGAGATCACCAACTTCAAAATGCAGCTACTGCTACTTGTGTGGCACTTGTTCTTCGCAATTTAGGATGGAGTATTTCTGATAAATCTATTAGGTATGGTTTAGAGGATACATACCTTCTTGGAAGGAGTCAATTTCTAACATCTGAAGAAGCTGAGGTATTAGGACTTACTGGATCAACAGTACTGCTTGATGGAGCCCACACCAAAGAATCTGCCAAAGCTCTGATGAATACCATAAGGATGGCATTTCCCAAGGCTCAATTGGTTTTTGTTGTTGCAATGGCAAGTGACAAAGATCATGTGGGATTTGCTCGAGAGATTCTCTCAGGTGTACATGTGGAGACTGTCGTTTTGACAGAAGCTGCTATTGCTGGAGGTGTAACTCGAACAACACCAGCATCTTTGTTGAGAGATTCTTGGATTAAAGCTTCTGGTGAGCTTGGCATTGGTATTGTTCATGATGGAATGGCAGAATACAGTGAATTATTAAAGGAACAACCAGTAGGCTCTGAAAGCAATTTGGGTGATGGTAAGACCGTGTTGGCTACTGAGTCATGTTTAAAGGGTTGTTTGAGAACCGCAAATCAGATTCTAAGCAGACGAGGGGATGAAAAGCGTGTTATTGTCTTCACCGGGTCTCTGCATATTGCAGCTTCAGTCTTAGCTTCTCTTGCTGGTTAA 1611 0.4327 MLLSSIRRGFTSRVGPIRTLSSHSEMKDFLDYLDSLKNYEKSGVPKGAGTDSSDGFDLGRMRCLMERFGNPHSKFKAVHIAGTKGKASTAAFVSNILRNEGYSVGCYTSPHILTIRERILLGKSGHLVSAKLLNDLFRRIKPDIDQAMKEENGCISHFEVFTTMAFLLFADENVDFAVIEAGLGGARDATNIISSSGLVASVITTIGEEHLAALGGSLETIAMAKAGIIKQDRPLVLGGPFVPHIERIIRDKAVAMNSPVVSAYDTGNKCTMKSFSILNGRPCQICDILIQVVKDMKMSCKLHDVKLQMLGDHQLQNAATATCVALVLRNLGWSISDKSIRYGLEDTYLLGRSQFLTSEEAEVLGLTGSTVLLDGAHTKESAKALMNTIRMAFPKAQLVFVVAMASDKDHVGFAREILSGVHVETVVLTEAAIAGGVTRTTPASLLRDSWIKASGELGIGIVHDGMAEYSELLKEQPVGSESNLGDGKTVLATESCLKGCLRTANQILSRRGDEKRVIVFTGSLHIAASVLASLAG* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1354 536 Pfam Mur ligase middle domain 80 325 IPR013221 GO:0005524|GO:0009058|GO:0016881
Gso14g1354 536 ProSitePatterns Folylpolyglutamate synthase signature 2. 178 193 IPR018109 GO:0004326|GO:0005524|GO:0009396
Gso14g1354 536 ProSitePatterns Folylpolyglutamate synthase signature 1. 78 101 IPR018109 GO:0004326|GO:0005524|GO:0009396
Gso14g1354 536 PANTHER FOLYLPOLYGLUTAMATE SYNTHASE-RELATED 23 533 IPR001645 GO:0004326|GO:0005524|GO:0009396
Gso14g1354 536 SUPERFAMILY MurD-like peptide ligases, catalytic domain 55 348 IPR036565 GO:0005524|GO:0009058
Gso14g1354 536 PANTHER DIHYDROFOLATE SYNTHETASE-RELATED 23 533 - -
Gso14g1354 536 Gene3D - 17 348 IPR036565 GO:0005524|GO:0009058
Gso14g1354 536 Gene3D - 357 535 IPR036615 GO:0009058|GO:0016881
Gso14g1354 536 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 362 534 IPR036615 GO:0009058|GO:0016881
Gso14g1354 536 TIGRFAM folC: bifunctional protein FolC 58 532 IPR001645 GO:0004326|GO:0005524|GO:0009396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1354 Gso-Chr14 39853501 39864897 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1354 K20457 - gmx:100816933 1016.53