Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1147 ATGGGATTGTCGAATGCTTCTGAGGATTTGTCATCAGAGATGGAGGTTGATGCCTTTAGACGCCTTTTTCCACTTCGATATTTTGAGCGTCATCTTGCTGAATCTATAAGGCCAGATGGTAGACCACTTGGAAAAGCTAGAGAAACAAGTATTTTTCTTGGTGCTGTTGCGTCTGCTAATGGGTCGGCTCTTGTGAAGATTGGATCAACTACTATGTTGACTGCTATTAAAATGGAAGTCATGACTCCCTCCTTGGAGTCTCCAGATGAGGGCTGTCTAGCTATTGATTTCCACATGCCTCCAATTTGTTCTCCGATTGTTAGGCCTGGCAGGCCTGCTGAAGCATCACCGGTGGTATCAAAGCAGTTGTCTGACACCATTTCAAGTTCTAGAATGATTGATTTGAAAGAATTGTCCTTGGTTGGTGGAAAAGCTGCATGGATGGCTTACCTGAATGCTGCCTTCTCTATCATGCAGGATATCTATTGTTTGGATGCTGATGGTGCTCTTTTTGATGCTGCATTAATTTCTGCAGTTGCTGCCTTATCTCATTTGCAAATTCCTGCTGTTGCCATGAATGATGATGGCAAAATAGTACTCGTGTCTGGCGAAGATGGACAAAAGCCAGTCAATAAGGAGAAGAGGAAGCTTACATTAAGAAGCATTCCATTCTCATTAACATGCATACTTCACAAGAATTACATCTTGGCAGATCCTACTGCTGAAGAAGAATCTATTATGGAAACCCATGTGACAATAGTTTTGGATACATCCGGTCAACTAATATCTCTTTACAAGCCTGGTGGGCCAGCTCTTGCCTATACTTCTGCTATCCAGGATTGTGTCGGGCTAACGGGGCAAAGAGTAAAGGAACTAAAGAGCTACTTAGACAAAGAAAATTCTGCTATGGAGGTGGTGGTTTGA 924 0.4286 MGLSNASEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASANGSALVKIGSTTMLTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVSKQLSDTISSSRMIDLKELSLVGGKAAWMAYLNAAFSIMQDIYCLDADGALFDAALISAVAALSHLQIPAVAMNDDGKIVLVSGEDGQKPVNKEKRKLTLRSIPFSLTCILHKNYILADPTAEEESIMETHVTIVLDTSGQLISLYKPGGPALAYTSAIQDCVGLTGQRVKELKSYLDKENSAMEVVV* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1147 307 Pfam 3' exoribonuclease family, domain 2 223 269 IPR015847 -
Gso14g1147 307 SUPERFAMILY Ribonuclease PH domain 2-like 217 300 IPR036345 -
Gso14g1147 307 Gene3D - 15 305 IPR027408 -
Gso14g1147 307 Pfam 3' exoribonuclease family, domain 1 47 188 IPR001247 -
Gso14g1147 307 SUPERFAMILY Ribosomal protein S5 domain 2-like 17 245 IPR020568 -
Gso14g1147 307 CDD RNase_PH_RRP43 20 294 - -
Gso14g1147 307 PANTHER - 13 305 - -
Gso14g1147 307 PANTHER EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN 13 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1147 Gso-Chr14 25647893 25658458 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1147 K12586 - gmx:100812232 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1147 14 25647893 25658458 Gso14g1147 14 25647893 25658458 ECH