Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1116 ATGGCATTTGCAGTTAGGGCTTTATGGGCAGTGAGAAAGAGTTGCAGAGGAAGTCCTCGCCGTTATTGTTTCAGCAAACATGCGCATTCAAATTCAAATTCACATTCAAATTCAAATCCCCTTCTCTTGAAATTGCTTCAGGTTCCGAACTCGCACATTAAAACGACGCTGGATCAGGAAATGGCTTCCCTTCAAAGCTCGCAACGTTCTTGGGACTTCCTTATTACCTCTCTCTCCCCTTCTTCCTCCGACAAAGCTCGATTGATTTTGGAATGGATTTTGGAGAAGATGCTGAAAGAAAATGAGAAAGATCGAGATCTCTTCTCTGAACTCATCTTTCTATGTGGAAAAGTGAAGGACGTGATGCTAGGAATGCGTGTGTTTAGTTCTATGGAGGCTACTGGAGTTAAACCCAATTCACTAGTTTTCAATTCCCTTATAAGTGTTTGTTTGTCTTCCCATGATATTGTTACAGCAGTTAGTTTATTTGAGATCATGGAGAGTTCAGAGAGCTATAAACCTGATTTTCACACTTATAATATCTTTATTTCAGCATTTTCCAAGTCAGGGAATGTTGATGCCATGTTAGCTTGGTACTCAGCGAAGAAGGCTGCCAGACTTGGTCCTGATCTTCAAATGTTTGAATCCCTCATATCAGGCTGTGTTAATTCTAGAAAGTTTAAGATTGCTGATAGAATTTTTGAAGAAATGATGATTTCTGGAATTGTTCCTAGTGCTTCCATAATTGAAAGTATGCTTAATGGGATTTGCAAGCAAAAGAGATTGGGTCGGGCAGAGGAGTTTTTCACGTTTGCGATGGATTCTGGATGGGAAATAAATGAGAACATGGTTGATAAGTTAGTAGCTATGTATCTTCAACTAGGGAAAGCGGAAGAAATGGAAGGTCTACTTAAAACTATGATGAAGCCCTGTGTTACTACTACTGGTGTTCTCACACGAATTCATTGTGGGATTGTGAAGATGTATGCAATGGTAGATAGATTGGATGATATAGAGTTTGCTGTGGGTAGAATGCTTAAACAAGGGTTGTCATTCACAAGTGCAGATGATGTTGAAAAGGTCATCTGCTCATACTTTAGAAGGGAAGCTTATGATAGGCTAGACATATTCTTGGAATGTTTAAAGAGATGCTATGTCCTTAATAAATCAACATATGATTTGTTGATATCTGGCTATAAAAGAGCACGCTTGCTTGAAAAAGTAGAAAGGGTGATGGAAGACATGAAATCAGCAGGATTAGTTTAA 1266 0.3894 MAFAVRALWAVRKSCRGSPRRYCFSKHAHSNSNSHSNSNPLLLKLLQVPNSHIKTTLDQEMASLQSSQRSWDFLITSLSPSSSDKARLILEWILEKMLKENEKDRDLFSELIFLCGKVKDVMLGMRVFSSMEATGVKPNSLVFNSLISVCLSSHDIVTAVSLFEIMESSESYKPDFHTYNIFISAFSKSGNVDAMLAWYSAKKAARLGPDLQMFESLISGCVNSRKFKIADRIFEEMMISGIVPSASIIESMLNGICKQKRLGRAEEFFTFAMDSGWEINENMVDKLVAMYLQLGKAEEMEGLLKTMMKPCVTTTGVLTRIHCGIVKMYAMVDRLDDIEFAVGRMLKQGLSFTSADDVEKVICSYFRREAYDRLDIFLECLKRCYVLNKSTYDLLISGYKRARLLEKVERVMEDMKSAGLV* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1116 421 Gene3D Tetratricopeptide repeat domain 205 325 IPR011990 GO:0005515
Gso14g1116 421 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 175 209 IPR002885 -
Gso14g1116 421 Gene3D Tetratricopeptide repeat domain 58 204 IPR011990 GO:0005515
Gso14g1116 421 Pfam PPR repeat 390 420 IPR002885 -
Gso14g1116 421 TIGRFAM PPR: pentatricopeptide repeat domain 214 245 IPR002885 -
Gso14g1116 421 TIGRFAM PPR: pentatricopeptide repeat domain 177 199 IPR002885 -
Gso14g1116 421 TIGRFAM PPR: pentatricopeptide repeat domain 391 421 IPR002885 -
Gso14g1116 421 Pfam Pentatricopeptide repeat domain 208 246 IPR002885 -
Gso14g1116 421 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 420 - -
Gso14g1116 421 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 420 - -
Gso14g1116 421 Pfam PPR repeat family 138 188 IPR002885 -
Gso14g1116 421 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 210 244 IPR002885 -
Gso14g1116 421 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 388 421 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1116 104 420 Glycosyltransferase AT1G05670 22.601 2.75e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1116 - - gmx:100778561 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1116 14 23494500 23497254 Gso14g1116 14 23494500 23497254 ECH