Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1108 ATGGCTTCTCCTTCGCATCGCTCTCGCATCGATCAGTTTTACGCTTCGAAGAAGAGGAAAGCAGCGTCGCCTGTTCCTAAAGCCGGGAGATTCGAAAAAGGTGCGAGGCATGGGGCTGATGAGTCTCCGAGTGCCAAAGGCACTTTGGAGGGTTACTTGGTTTCGTCACAGGACGGTGGTGGTGACGGCTGCGGTGACGCAAACACTGTTAAGGTTAAGAGAAACTTGACATCGGAGATTGGTGGTTCTCTTGACAATGAGCTTAATAAGCATACTGTTTCATTGGGTCAAGGGTGTGGAGATTCTCAATCTATTCAGCCGAGTGAAATTGGACAGGGTGTGGCGAAATCGGAGAGGAAACAGTTTGCTGCTGACTTTTTGTCTTTGTATTGCAGTGTATTGCATCCGAGTGTGGGTTTGCCGTTGGAGATGAAAATGGATGATCACAAGAGACATGGTTCACCAACATTAGTAGAGGGAAATAGTGTTTTACTGCGGAAGAATAATGACACTGCTGGTGAGCTATGTTTCGGTGGTGAAAATACATTGTTGAGTGTGAAGATCGATGAAGACATCAAGTCTGGTGTTGTTGGTAATAATAATTCTATGGGATGTGTTCCTGGCTCTTGTACGAAGGTTTCTGGTGGTGGTGATACTACTGGCTTTGAGACAGGCTTTAGGAAATGTAATAATACACCTAAACCATCAATGAAATTGGCTGAATACTACAACACACCGGGGTCTTTGATTGTTAAAGCAAGTGTTAGGGAGACTCCAAAGTCAACACGCGGCAGCTCATCATTTTCGCCTGGAGAGGCATTTTGGAATGAGGCAATTCAACTTGCTGATGGTTTGTGTGTTCCCATGGGTAATGATCCTTCTAAGGTTATGGGAGAAAGTAATGTGGTGGAAGAGGAACCTGAGATGAAGAACTCATGCAATTTACAAAATTATGATGGCAAACCAAGGAAAATATTGGATCAAAGTAAAAACAGAATCCGGAATAGGGAAATGGGTGCTCCTTTAGGGTTAGTTGGGATGCACACTAAAGATTCTGTGAAAGAAGCATCCAGCCTTCCTGTTAAACATTTTGATTTTTCGTTTGAGGACAACAATTTGGAAGAAAATACCTTGCAAGACTGTCGTGTTGGTGATTCAATCAATGTTACTTGTGTGGCTGGTAAACAGTATGATTCATGTTCTATGATAGGTCATACATATGAAAAGATGAATGAAGTGCAAGAGAATACTTTAGTAGATACATTAGGCAAAAGGGTTTGTCAGGATAATGTTAGCATGACATCTAATTCACCCCACAATGAGGTCAGGACACCGATTAGTGCACATGCATCTGATGAAGCCAGTACTCCTTCAACTAGTGTATCACTTAATGATCATTTTGACCTAAACAGCTGGCTTCCTCCTGAAATATGCAGCATATATAGAAAGAAAGGAATCTCAAGACTTTACAGTTGGCAGGTTGATTGCCTTCGAGTGGATGGTGTCCTACAGAGAAGAAATCTTGTATATTGTGCTTCTACAAGTGCTGGTAAGAGTTTTGTTGCTGAGATTTTAATGCTGCGGAGGGTGATAATAACTGGAAAAATGGCACTACTTGTTCTTCCGTATGTATCAATTTGTGCAGAAAAGGCTGAACACCTCGAACGTCTCCTTGATCCACTTGGTAAACATGTTCGTAGTTATTATGGAAACCAAGGTGGTGGAACACTTCCTAAAGATACTTCTGTAGCTGTCTGCACTATAGAGAAGGCAAACTCACTAGTTAATAGATTATTGGAAGAGGGGCGTCTATCAGAAATGGGAATTATCGTAATTGATGAACTGCATATGGTTGGTGATCCAAGAAGAGGTTATCTACTTGAACTTATGTTGACAAAGCTTCGTTATGCAGCAGGGGAAGGTATTCCAAAATCAAGTGATGGAGAAAGTTCCGGTGGAAGCAGTGATAAGGCTGATCCTGCCCAAGGTCTGCAAATTGTCGGAATGAGTGCAACAATGCCAAATGTTGCAGCAGTTGCTGACTGGCTTCAAGCAGCACTATACCAGACCGAGTTCCGGCCAGTTCCTCTAGAAGAATATATAAAAGTTGGTAATTCCATTTACAACAAAAGTATGGAACTTTGTAGAATAATCTCAAAAGCGGCTGAACTTGGTGGTAAAGATCCAGATCATGTTGTTGAACTATGTAATGAGGTTGTTCAAGAGGGACACTCAGTTTTAATATTTTGCTCTAGCCGGAAGGGTTGTGAGTCAACTGCAAGGCACATTGCAAAGTTCCTTAAAAGCTTTACTGTTGATGCTAATGATTGTGAGTTTGCCGATATTACTTCTGCTATTAACTCCTTGGGAAAGTGCCCTGCTGGGTTGGACCCCATATTACAGGAAACTCTTCCTTCTGGTGTTGCATTTCACCATGCTGGCCTTACGGTTGAGGAACGAGAGATTGTTGAAACCTGTTATCGGAAGGGCCTTTTACGTGTCTTAACTGCCACGTCAACCTTAGCAGCTGGGGTAAATCTGCCAGCTAGGAGGGTAATTTTCCGCCAACCTAGAATTGGTTGTGATTTTCTAGATGGGACGAGGTACAAACAGATGGCTGGTCGTGCTGGTCGAACTGGAATTGATACAAAAGGAGAAAGTATACTTATCTGTAAACCAGAAGAACTAAAAAAGGTTTCGGGACTGCTTAATGAAAGCTGTCCTCCATTACATTCCTGTTTGTCCGAAGACATGAATGGAATGACTCATGCAATCTTAGAAGTAGTGGCTGGAGGAATTGTTCAAACTGCTAGCGATATTAACCGGTATGTTAGATGTACCCTTTTAAATTCTACAAAACCATTTCTAGACGTGGTGAAATCTGCACAAGAATCCCTTCGATGGTTGTGCCAAAGAAAATTTCTTGAATGGAATGAAGACACTAAACTCTACAGTACCACACCTCTTGGACGTGCATCTTTTGGCAGTTCTCTTTGTCCACAAGAGTCACTTATTGTGTTAGCTGATCTTTCAAGGGCAAGGGAAGGATTTGTCCTTGCATCTGACTTGCATTTAGTTTACTTGGTGACACCAATCAATGTAGATGTTGAGCCAGATTGGGAATTGTACTATGAGCATTTTGTGAAATTGTCTCTGCTTGACCAGTCAGTTGGCAATCGAGTAGGTGTGACAGAACCATTCTTGATGTATATGGCACATGGTGCACCACTACGTGCTTCAAACAAGTCAAGAGATAATACAAGATCATTGCACAATCAACGAAGAAATCAACTTGGGATTTCCAGTGCAACAGCTAACTATGATGATCAAACACTTCGTGTCTGTAGAAGATTCTATGTTGCTCTCATTTTGTCACTTCTAGTTCAGGAAATTCCTGTGGGTGAGGTTTGTGAAGCATTCAAAGTTGCCAGGGGAATGGTTCAAGCCTTGCAAGAGAATGCTGGTAGGTTTGCATCTATGGTTGCTGTGTTTTGTGAGCGACTTGGGTGGCATGATCTTGAAGGCTTAGTTGCTAAGTTTCAAAACCGTGTATCATTTGGAGTTAGAGCAGAGATTGTAGAACTTACCACTATTCCCTATGTTAAAGGTTCTCGAGCCAGATCACTCTATAAAGCTGGTTTACGTACACCCCATGCAATTGCTGAGGCATCCATTCCTGAGATAGTAAAAGCACTTTTTGAATCTTCATCATGGGCCACAGAAGGTTCTGCACAAAGGGGATTTCAATTTGGTATAGCAAAAAAGATAAAGAATGGTGCCCGCAAGATTGTTTTTGATAAAGCTGAGGAGGCAAGTAACGCTGCTTTCTCAGCCTTTAAATCACTTGGGTTCAATGTCCCACAGTTTGATCCTCAAATATTATCTACTGCTGCTCGTGATTCTATCAGGCTAGGAACTGGAAGTACCTCTGGAAGTGACACAACTGATACTAGTCATAGTTTTGTTAATGCAGATTGCATTGATAATACTAATAAATTTACTTTAGATAAAGAAAAAGAAGACTTAATAAAATTATCTGTTAACGGTACTGTGGCTTCTGTAGAAGGAAAATCAAGAAGCAGGATGATATGTAGCTTGTCCAGTGTTCCAGTTGCAGGACCTAAAATGGATGAACTCAATAGGACTTCTGACCATACCAAAAATGCAGACATGACCATTCTCTCTGTTCAATTGCAGAAACCAAATGATAAATCTGGTGTACATGATGGGTGCGATGCTCATTGTACAGAGGAAGCGCATAAGAATGGAAATTTGGCTAGTGGTAATGCTGGTAGTTCCAGCCAGAAAGGTCCCATTAATGCAGTTAGTAGTCCTGGTGGGCTTGATTCATTTTTGGATCTATGGGACTCTATGCCAGAGTTCTATTTTGATATCCATTATATCAAACGATTGGAATTGCACTCTACTGCTCCCTTTGAAATACATGGCATAGCTGTTTGTTGGGAAAACTCTTCTGTGTACTACATTAATCTTCCCAGAGATATTCTGTTGTCTGACAGTATAAAAGATGGCTGTTTATCCTTGAGTGCATGCAGTCATAAGAAGAAAGTTTCATCTTCTAATTCTAAGCAAGATCTAGAGATTGCTAGATCTAGATGGAACAGAATTAGTAAAATAATAGGGAAAATAAATGTCAGAAAGTTCACCTGGAATTTGAAGATTCAGATGCAGGTGCTGAAAAGGCCAGCATTTTCAGTTCAGAGATTTGGTTGCTTGGACACACTTGGAAAAAGTATGGACCTTGAAGTTGTAGACAATTCTTATGTGTTATTGCCCCCTATACATGTTAAAGATGCAATTGATATGTGCATTGTGGCTTGGATTCTTTGGCCCGATGAAGAGAGTAGCTCTAGTCCAAACCTGGATAAGGAGGTAAAGAAGAGGTTATCCTCTGAGGATGCTGCAGTCGCCAATCAGAGTGGCAGGTGGAGGAATCAGATGCGAAGGGCTGCTCATAATGGTTGCTGCCGTCGGGTTGCTCAAATACGAGCATTAAGTTCTGTTCTTTGGAAATTACTTGTTTCTGAGAAACTTGTTGAAGTGCTTATGGATATAGAAATCCCATTGGTGAATGTTGTTGCTGACATGGAGCTTTGGGGAATTGGTGTTGATTTGGAGAGATGCATCCAGGCTCGTAAATTGTTGATTAAAAGGCTAAAGCATCTTGAGAAGGAAGCTTATAAACTGGCTGGAACGACATTTTCATTAAATATGCCAGCAGATATTGCAAGAGTGCTGTATGAACACTTGAAGCTGCCCATACCTGATGTGCGGAATAAGGGAAAGCAACATCCGAGTACTAGCAAGCACTGCTTGGATGCACTGAGGCATGAACATCCCATTGTTCCAGTCATTAAAGAACATCGAACAATGGCAAAGCTGTTGAACTCTACGTTAGGATCAATTTGTTCCCTGGCTAGGCTATCTGTAAGCACACAGAAGTATACATTACATGGTCATTGGCTCCAGACGTCCACGGCAACTGGTCGGCTTTCAATGGAGGAACCTAATCTTCAGTGTGTTGAGCATGCAGTAGAATTCAAAATGAAAGATGAAAATGAAGGTGATGCTGACGAGAGTTATTGTACAATTAATGCTCGTGATTTCTTTGTTCCTACTCAGGACAACTGGTTACTGTTAACAGCAGATTATTCTCAGATAGAATTGAGATTGATGGCTCACTTCTCTAAAGACTCTTCACTTGTTGAACTTCTCAGTAAGCCTGATGGTGATGTCTTTACAATGATAGCAGCAAGATGGACTGGGTGTCCTGAGGTTTCTGTGTGTTCTAAGGAGAGAGAGCAGACCAAAAGGATGGTGTATGGCATTCTTTATGGTATGGGGGTCAATAGCCTTGCAGAACAACTGGATTGCACTTCTGATGAAGCTGCTGAAAAGATTGCTAACTTCAAAAGCTCTTTTCCTGGTGTTTCTTCCTGGCTTCTTGAAGCCGTTGCGTCTTGTCGCAGTAAAGGATATGTTGAGACTCTTAAGGGAAGAAAAAGGTTTTTGTCAAAAATAAAATATGGCAGCAGTACAGAAAAATCAAAAGCTCAGAGGCAAGCTGTAAATTCCATTTGTCAGGGATCTGCGGCAGACATAATTAAGATTGCAATGTTAAGAATTTACTCTGCAATTGTCACTGGATTTGATAGTCCAGATTCCAGTTCTTCACTAGCAACCAAGTTTCACATGCTTAAAGATCGTTGCCGGATTCTGTTACAGGTACACGATGAATTAATGTTGGAAGTTGATCCTTCTGTGATAAAAGAAGCAGCCCTACTATTGCAGACAAGCATGGAGAATGCGGTCTCACTTCTTGTTCCTTTGCATGTCAAACTTAAGGTTGGAAGAACATGGGGATCTTTGGAGCCATATACATCCGATAAATTCAACAATGCCACTCTTGTGGCTGAATCCTGA 6444 0.415 MASPSHRSRIDQFYASKKRKAASPVPKAGRFEKGARHGADESPSAKGTLEGYLVSSQDGGGDGCGDANTVKVKRNLTSEIGGSLDNELNKHTVSLGQGCGDSQSIQPSEIGQGVAKSERKQFAADFLSLYCSVLHPSVGLPLEMKMDDHKRHGSPTLVEGNSVLLRKNNDTAGELCFGGENTLLSVKIDEDIKSGVVGNNNSMGCVPGSCTKVSGGGDTTGFETGFRKCNNTPKPSMKLAEYYNTPGSLIVKASVRETPKSTRGSSSFSPGEAFWNEAIQLADGLCVPMGNDPSKVMGESNVVEEEPEMKNSCNLQNYDGKPRKILDQSKNRIRNREMGAPLGLVGMHTKDSVKEASSLPVKHFDFSFEDNNLEENTLQDCRVGDSINVTCVAGKQYDSCSMIGHTYEKMNEVQENTLVDTLGKRVCQDNVSMTSNSPHNEVRTPISAHASDEASTPSTSVSLNDHFDLNSWLPPEICSIYRKKGISRLYSWQVDCLRVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVIITGKMALLVLPYVSICAEKAEHLERLLDPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLVNRLLEEGRLSEMGIIVIDELHMVGDPRRGYLLELMLTKLRYAAGEGIPKSSDGESSGGSSDKADPAQGLQIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEEYIKVGNSIYNKSMELCRIISKAAELGGKDPDHVVELCNEVVQEGHSVLIFCSSRKGCESTARHIAKFLKSFTVDANDCEFADITSAINSLGKCPAGLDPILQETLPSGVAFHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGCDFLDGTRYKQMAGRAGRTGIDTKGESILICKPEELKKVSGLLNESCPPLHSCLSEDMNGMTHAILEVVAGGIVQTASDINRYVRCTLLNSTKPFLDVVKSAQESLRWLCQRKFLEWNEDTKLYSTTPLGRASFGSSLCPQESLIVLADLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYEHFVKLSLLDQSVGNRVGVTEPFLMYMAHGAPLRASNKSRDNTRSLHNQRRNQLGISSATANYDDQTLRVCRRFYVALILSLLVQEIPVGEVCEAFKVARGMVQALQENAGRFASMVAVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARSLYKAGLRTPHAIAEASIPEIVKALFESSSWATEGSAQRGFQFGIAKKIKNGARKIVFDKAEEASNAAFSAFKSLGFNVPQFDPQILSTAARDSIRLGTGSTSGSDTTDTSHSFVNADCIDNTNKFTLDKEKEDLIKLSVNGTVASVEGKSRSRMICSLSSVPVAGPKMDELNRTSDHTKNADMTILSVQLQKPNDKSGVHDGCDAHCTEEAHKNGNLASGNAGSSSQKGPINAVSSPGGLDSFLDLWDSMPEFYFDIHYIKRLELHSTAPFEIHGIAVCWENSSVYYINLPRDILLSDSIKDGCLSLSACSHKKKVSSSNSKQDLEIARSRWNRISKIIGKINVRKFTWNLKIQMQVLKRPAFSVQRFGCLDTLGKSMDLEVVDNSYVLLPPIHVKDAIDMCIVAWILWPDEESSSSPNLDKEVKKRLSSEDAAVANQSGRWRNQMRRAAHNGCCRRVAQIRALSSVLWKLLVSEKLVEVLMDIEIPLVNVVADMELWGIGVDLERCIQARKLLIKRLKHLEKEAYKLAGTTFSLNMPADIARVLYEHLKLPIPDVRNKGKQHPSTSKHCLDALRHEHPIVPVIKEHRTMAKLLNSTLGSICSLARLSVSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVEFKMKDENEGDADESYCTINARDFFVPTQDNWLLLTADYSQIELRLMAHFSKDSSLVELLSKPDGDVFTMIAARWTGCPEVSVCSKEREQTKRMVYGILYGMGVNSLAEQLDCTSDEAAEKIANFKSSFPGVSSWLLEAVASCRSKGYVETLKGRKRFLSKIKYGSSTEKSKAQRQAVNSICQGSAADIIKIAMLRIYSAIVTGFDSPDSSSSLATKFHMLKDRCRILLQVHDELMLEVDPSVIKEAALLLQTSMENAVSLLVPLHVKLKVGRTWGSLEPYTSDKFNNATLVAES* 2148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1108 2147 Gene3D Taq DNA Polymerase; Chain T, domain 4 1707 1816 - -
Gso14g1108 2147 Gene3D - 702 900 IPR027417 -
Gso14g1108 2147 MobiDBLite consensus disorder prediction 1 47 - -
Gso14g1108 2147 Gene3D - 1067 1211 - -
Gso14g1108 2147 SMART polaultra3 1870 2095 IPR001098 GO:0003677|GO:0003887|GO:0006260
Gso14g1108 2147 Pfam DEAD/DEAH box helicase 502 675 IPR011545 GO:0003676|GO:0005524
Gso14g1108 2147 SUPERFAMILY DNA/RNA polymerases 1685 2130 IPR043502 -
Gso14g1108 2147 CDD DEXHc_POLQ-like 473 694 - -
Gso14g1108 2147 Gene3D - 1894 2038 - -
Gso14g1108 2147 PANTHER DNA POLYMERASE I 489 2135 IPR002298 GO:0003887|GO:0006261
Gso14g1108 2147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 894 IPR027417 -
Gso14g1108 2147 Gene3D - 1440 1704 IPR036397 GO:0003676
Gso14g1108 2147 Gene3D - 472 694 IPR027417 -
Gso14g1108 2147 SMART ultradead3 485 704 IPR014001 -
Gso14g1108 2147 Pfam DNA polymerase family A 1714 2128 IPR001098 GO:0003677|GO:0003887|GO:0006260
Gso14g1108 2147 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 731 926 IPR001650 -
Gso14g1108 2147 Coils Coil 1712 1732 - -
Gso14g1108 2147 MobiDBLite consensus disorder prediction 642 661 - -
Gso14g1108 2147 Pfam Helix-turn-helix domain 885 976 IPR046931 -
Gso14g1108 2147 Gene3D - 1833 2127 - -
Gso14g1108 2147 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 499 691 IPR014001 -
Gso14g1108 2147 Pfam Helicase conserved C-terminal domain 731 880 IPR001650 -
Gso14g1108 2147 PANTHER DNA POLYMERASE THETA 489 2135 - -
Gso14g1108 2147 CDD DNA_pol_A_theta 1707 2130 - -
Gso14g1108 2147 SMART helicmild6 798 880 IPR001650 -
Gso14g1108 2147 CDD SF2_C_Ski2 693 892 - -
Gso14g1108 2147 PRINTS DNA-polymerase family A (pol I) signature 1824 1846 IPR002298 GO:0003887|GO:0006261
Gso14g1108 2147 PRINTS DNA-polymerase family A (pol I) signature 1940 1965 IPR002298 GO:0003887|GO:0006261
Gso14g1108 2147 PRINTS DNA-polymerase family A (pol I) signature 1977 1988 IPR002298 GO:0003887|GO:0006261
Gso14g1108 2147 PRINTS DNA-polymerase family A (pol I) signature 1999 2010 IPR002298 GO:0003887|GO:0006261
Gso14g1108 2147 PRINTS DNA-polymerase family A (pol I) signature 2078 2091 IPR002298 GO:0003887|GO:0006261
Gso14g1108 2147 SUPERFAMILY Sec63 N-terminal domain-like 1102 1229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1108 Gso-Chr14 22595528 22624049 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1108 K02349 - gmx:100813857 4211.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1108 14 22595528 22624049 Gso14g1108 14 22595528 22624049 ECH