LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso14g1074	ATGGCGCTGCTTTCCAGGATAACAACATCCTCATTACTACTATCCCTATCCTCCAAACCCATTTGCAACGCCTTTCTGCTTTCTCGTTCAACCGCCACAACCTGCACAAAACATCAGAACAAGAAGAAAAAGGAAAACGCCAAAGCAGCGTTGGCGAAGGAGAAGCGCAGAACCCGTTCCGACAAACAGTTCAACCACGACGCAATAATCGAGCGTTGCAACATAAACGACACTGACACCGACACCAAGTTCTCTCACGTTCCTGTGATGCTGGGCGAAGTCTTGGACGTGTTCTCCTCTACTTTCTTAACCTCCTTCGTCGATTGCACTCTCGGCGCCGCAGGCCACTCCACCGCCGTGATCAAGGGGCATCAAGAGTTGAAGTATTTCGTGGGGATGGACGTGGACTCTGTCGCACACGACATTGCCCAGCCTCGTCTTGATGCCGTTTTGAACGGTGGTGTCAAAGCGATTACCGTTTTGAGGAATTTTAGAGACGTCAAGTCTGTGCTTAGAGAATTTGATGAGCTAAAGTTGGGGGTTGACGGCATCTTAATGGACTTGGGGATTTCCTCTATGCAGGTAGATGATCCTGTGAGAGGATTCAGTGTGCTTGGTGATGGACCACTTGATATGCGGATGGATCCTCAGGCAAGTCTTAAAGCAGAAGACATATTAAATTCCTGGCCAGATTCTGAAGTGGGCCGTATCCTAAGGGAGTACGGGGAAGAAAGTAATTGGCGAACTCTGCAAAAGAAAATTGTCAATGCCCGATTACATGGTGGATTGCATTCGACTAGTGACTTGCTCGATCTTATTCGGCGCGTGGCTCCTCCAATGAGAGGTGGACGGCAAGGTTGGATAAAGACGGCAACCCGGGTGTTTCAAGCTCTGAGAATCGCTGTTAATGATGAACTGAAGACACTTGAGGATTCTCTCTATTATTGTTTTGATTGCCTTGCACCTGGGGGTAGGCTTGCTGTCATATCTTTTCATAGTCTAGAGGACAGAATTGTGAAACAGACATTTCTTAACATAATCAAAGGGAGCAAAGATGTGGAAGAAAGGGAGAGCCTCAACAGTGATTTGAGGAAGACTAGTGATGAAATCAAAGAAAAAGAAGCATGGATAAAGCAAGTAATATATGGATCAAATGGAACAATTCTCACTAAAAGACCAATCACGCCATCAGGAGAAGAAGAAAAATTAAACCGGCGAAGTAGAAGTGCAAAGCTCAGGGTTATTCAGAAGCACTGA	1257	0.463	MALLSRITTSSLLLSLSSKPICNAFLLSRSTATTCTKHQNKKKKENAKAALAKEKRRTRSDKQFNHDAIIERCNINDTDTDTKFSHVPVMLGEVLDVFSSTFLTSFVDCTLGAAGHSTAVIKGHQELKYFVGMDVDSVAHDIAQPRLDAVLNGGVKAITVLRNFRDVKSVLREFDELKLGVDGILMDLGISSMQVDDPVRGFSVLGDGPLDMRMDPQASLKAEDILNSWPDSEVGRILREYGEESNWRTLQKKIVNARLHGGLHSTSDLLDLIRRVAPPMRGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYYCFDCLAPGGRLAVISFHSLEDRIVKQTFLNIIKGSKDVEERESLNSDLRKTSDEIKEKEAWIKQVIYGSNGTILTKRPITPSGEEEKLNRRSRSAKLRVIQKH*	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso14g1074	418	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	86	417	IPR029063	-
	Gso14g1074	418	PANTHER	S-ADENOSYL-METHYLTRANSFERASE MRAW	57	417	IPR002903	GO:0008168
	Gso14g1074	418	Gene3D	Vaccinia Virus protein VP39	86	415	IPR029063	-
	Gso14g1074	418	Coils	Coil	37	61	-	-
	Gso14g1074	418	MobiDBLite	consensus disorder prediction	393	418	-	-
	Gso14g1074	418	MobiDBLite	consensus disorder prediction	45	59	-	-
	Gso14g1074	418	Pfam	MraW methylase family	84	417	IPR002903	GO:0008168
	Gso14g1074	418	TIGRFAM	TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase	83	417	IPR002903	GO:0008168
	Gso14g1074	418	Gene3D	Putative methyltransferase TM0872, insert domain	198	305	IPR023397	GO:0008168
	Gso14g1074	418	SUPERFAMILY	Putative methyltransferase TM0872, insert domain	200	303	IPR023397	GO:0008168
	Gso14g1074	418	MobiDBLite	consensus disorder prediction	37	59	-	-
	Gso14g1074	418	Hamap	Ribosomal RNA small subunit methyltransferase H [rsmH].	86	418	IPR002903	GO:0008168

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso14g1074	Gso-Chr14	18708104	18711768	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso14g1074	K03438		-	gmx:100787277	788.104