Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1055 ATGGAAGGGATGAAGCTTAAAAGGTGGCTCGTGAGTGTTTTGTTCCTCATTGTTGCCACAGTGAGCAATGCAGCAGGTGCATTTGTGGGGGTAAACATTGGCACTGATGTTACTGATCTTCCATCTGCTTCAAACGTGGTTGCTATTCTAAAAGCACATCAAATTACACACGTGCGTCTGTACAATGCCAATGAGCACATGCTACGAGCCCTTTCAAACACTGGCATTGAAGTGATTGTTGGTGTCACAGATGAAGAGATATTAGGCATTGGAGAATCTGCATCAGTTGCTGCAGCATGGATTAGTAAGAATGTGGCGGCATACATGCCATCCACTAACATCACAGCAATATCAGTAGGCAGTGAGGTTCTCACCTCAGTCCCAAATGTTGCACCTGTTCTGGTTCCTGCCATGAACCATCTTCACACAGCACTTGTTGCTTCAAACCTTAACTTTCGCATTAAGGTTTCAACGCCGCTGTCCATGGATATAATTTCTAGGCCTTTTCCTCCTTCTACAGCCACCTTTAACTCCTCATGGAACTCCACAATCTACCAACTCCTTCAGTTTTTGAAGAACACAAATTCCTCTTACATGTTAAATGCGTACCCTTATTATGGATACACTAAAGGAGATGGCATTTTCCCAATTGAATATGCTCTATTCAGTCCCCTCTCTCCAGTGAAGCAAATTGTTGACCCGAACACACTATTCCATTACAACAGCATGTTTGAGGCTATGGTGGATGCTACCTATTATGCCATAGAAGCCTTCAATTTCAATAATATACCTATTGTTGTCACGGAAACTGGTTGGCCAAGTTTTGGTGGAGCAAATGAACCAGATGCAAGTACAAAGAATGCTGAGACCTACAATAACAATTTAATCATGAGAGTACTCAATGGTTCAGGTCCCCCTAGCCAACCAAAGATAGCCATTAATACCTACTTATATGAATTATTCAATGAGGACAAGAGGAAAGGTCCTATATCAGAAAGGAATTGGGGTGTTTTTTATGCTAATGGAAGTAGTGTTTATTCCCTGAGTTTTAGTGCTGCCAACATGAGTAATGCAAATTCTCTAGGATCATTTTGTGTGGCTAAAGATGATGCAGACACTGATAAATTGCAAGCTGGCTTGAGCTGGGCTTGTGGACAAGGCCAAGCTAACTGTGTAGCTATTCAACCAGGGAGACCTTGCTATTCCCCCAATAACGTGAAGAGTCATGCCTCTTATGCTTATAATGATTATTTTCAAAAAATGCATAATGCTGGTGGAACATGTGACTTTGATGGTACAGCTACAAAAACTACTGAGGATCCCAGTTACGGGTCCTGTATATACGCGGGAAGTGCTAACGCAAGCATTGGTGGAAGGAGTTCATCTTCTACAGCACTTGGACTTGGACCTGTAAGTCCAATTGGTGCTAGTTTGAACTTGCAAGTGTCCCCCCTTCAGTATTTGACATCGTTTATTAGTGTAATTTTAGCTCTGGTGTTGTCTTGA 1506 0.4223 MEGMKLKRWLVSVLFLIVATVSNAAGAFVGVNIGTDVTDLPSASNVVAILKAHQITHVRLYNANEHMLRALSNTGIEVIVGVTDEEILGIGESASVAAAWISKNVAAYMPSTNITAISVGSEVLTSVPNVAPVLVPAMNHLHTALVASNLNFRIKVSTPLSMDIISRPFPPSTATFNSSWNSTIYQLLQFLKNTNSSYMLNAYPYYGYTKGDGIFPIEYALFSPLSPVKQIVDPNTLFHYNSMFEAMVDATYYAIEAFNFNNIPIVVTETGWPSFGGANEPDASTKNAETYNNNLIMRVLNGSGPPSQPKIAINTYLYELFNEDKRKGPISERNWGVFYANGSSVYSLSFSAANMSNANSLGSFCVAKDDADTDKLQAGLSWACGQGQANCVAIQPGRPCYSPNNVKSHASYAYNDYFQKMHNAGGTCDFDGTATKTTEDPSYGSCIYAGSANASIGGRSSSSTALGLGPVSPIGASLNLQVSPLQYLTSFISVILALVLS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1055 501 SUPERFAMILY (Trans)glycosidases 29 350 IPR017853 -
Gso14g1055 501 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Gso14g1055 501 Gene3D - 358 455 - -
Gso14g1055 501 Pfam X8 domain 364 435 IPR012946 -
Gso14g1055 501 Gene3D Glycosidases 28 357 - -
Gso14g1055 501 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 5 478 IPR044965 GO:0004553|GO:0005975
Gso14g1055 501 SMART X8_cls 363 448 IPR012946 -
Gso14g1055 501 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 5 478 - -
Gso14g1055 501 Pfam Glycosyl hydrolases family 17 29 350 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1055 Gso-Chr14 18212681 18216180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1055 4 482 Glycoside Hydrolase AT3G13560 64.583 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1055 K19892 - gmx:100786558 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1055 14 18212681 18216180 Gso17g1720 17 32558708 32563012 GST