LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso14g1033	ATGCGACGCACTCCTCCCACCATCCATTTCATCGCCGCCACCGACACCGCCGCAGCCACCGCCACCTCAATGTCTTCACGCCCACTTCACCGAGGACGCGGCAGAGGCTTCTCCGGCCGCCCCTACTCCGGCGACGCGCACTTACGCTCCGTCCGCGACGCCAATTTAGGACTCCGCCGTGGCGAGGGCGGAAGCTTCCTGAACCAAACGCCGCACCATCAGAATCCGCCTTACAATCCGAGGCCTCATCCGCCGCCGCCGCCTCACCATCATCGGCCTCAGTTCCGTCCATATCCGCCTCAGTTCCGTCCGCCTCCGCCGCAGTTTCGTCCGCATCCGATGCAATTTCGTCCGCCTCCGCCGTCTGATCACCGGCCGGCGTTTCGTCCGCCGCAGCATCTTCGGCCACGACCGCCAGATTATCGAGACTGGGAGCTTGCTTGGACTCCGCCGCCGCCTCCTCATTGTGAGCGGTTTAAAGTTCTTTCCTATAATATATTGGCTGACTACCTGGCTTTGGACCACCGGACCAAACTCTATTTTCACATACCTCGACACATTTTGGACTGGCAGTGGAGAAAGAGAAGCATAATTTTTGAGCTGGGGTTGTGGTCTGCTGATATCTTGTGTTTACAGGAGGTTGATAGATTTCATGAGTTGGAAGAGGAGTTGAAGCCTAAGGGATATAGCGGCATCTGGAAGATGCGTACAGGTAATCCAGTTGATGGCTGTGCAATCTTTTGGCGTAACTCAAGGTTCAAACTGTTATACGAAGAATGCATTGAGTTTAATAAGCTGGGACTCAGGGATAATGTTGCTCAACTATGTGTACTAGAATTCATTAATCAAAATGGATCTCTCCCATCCAGCTTGACAGGGTCTAGTAAAGTTGTGGTTTGCAACATTCATGTGCTTTACAATCCTAACAGGGGAGAAATTAAGCTTGGCCAGGTTCGAGTGCTGCTTGATAAGGCTAAAGCCGTTTCTAAACTCTGGAATGATGCCCCTGTAGCTATCTGTGGGGATTTTAATTGTACTCCCAAGAGTCCATTATATAACTTTATATCAGAACAGAAGTTAGATCTGTCCGGAATAGATAGGAATAAGGTATCAGGACAAGCTTCTGCTACAATTCATGCATCAAAGCTCTATTATGGTCCTAATTCTAGTGAAATATCTGCTAATGGTTCAGTTCAGGCAACATCCACTGAAGGTGACAAAGAAGACATTGAACAAAATAATTCTCGGTTGGACACGAGGGACCTGGACACTAAATGTCACAGTTTGGATAATCAACATACTCAGACTGTTTCAGATATGTCTGTTAACTCTTGTACAAATGTTGATTGTGGAAAGGAAAGTGATGCATATGCAGGAAAAGATACTCAGGAAACTTCTGTTGACCATTCTAAGGTCTCTTGTGAAGTTGGTAGCATAAAAGAACCTAATCCTTCTTATAGTGAAGGTAGGATCCATATTGATCATGTAAATGGTGACATTCATGACATTACACCCGTGACCTTCTCAGCTCCTGAAGAAGTTCACAGTGATGCAACTTGGCTTGGCAGCAATGAACATATACCAAATGCTGTCCCAACTTCAAATAAAGAATTATTAATTGAAGAATCCAACTTGCATGTGCCTGAAGGGAATAAACATGTGGAGTTTGACTGTGCCCCAACCTCTCTCCAGGAAGATGATCAATCTTCCAAGATGAGGATTGATCTTGAGTCGATAGATCTAGACAATATAGAAATTTCTTCAACTAAACCATCCAGCCAGACTTCAGTTTCATGTGTATTTGAAGATGAAGATAGTCCATCTCATGAAGAAATTGATAATGACCAAAATAACAGCTCATCAACTTCATATCTAGTTGACAAATTACATCACTTGTCCAACATTACCTTTCCACCAGACATGAAAGAGAAATCATTCTTTGATGAGATGGATAAAACCATTATAGGTGGTGAAAGTGAAGATGGCAGCCGTTTTGTATCTTCCTTGCATAATGCTGGAGAAGTGGCTTTTGATCTTGGCTCATCAATGAAATCAGATCTTGAAAAGCCATATCAATCTGAGGAATTAGATTCTGCTTCCAACAACTTGTTGCTGCCCGTAGAAAGCATTGAAATGGAGGATTACTTATCTCCAAGGCAGATTTCTGAATCCATTAATTCAGAGCAAGCTACTTATACTCCAGCATTGTGGACTCCTATGGAGATAGAAACTGCAACAGGAAATGCAGACTGCACCTTCTTGGAGCACCCTTTACAGCTTAGGAGCACATATACTGAAGCTATGGATTGTTCAGGGACTAGAGACCCCCATGGAGAGCCTCTGGTAACCAGTTATAATAGACGCTTCTTGGGAACTGTTGACTACATTTGGCGGTCTGAAGGTCTTCAAACAACCAGAGTTCTTGCTCCGATATCTAAACATGCCATGCAATGGACTCCGGGTTTCCCAACTAAGAAATGGGGTAGTGATCATATTGCATTGGTTACCGAGTTGGCTTTCTTGAAAGACAGTACCGACACTAGCAACGATGTTAAATAG	2559	0.4502	MRRTPPTIHFIAATDTAAATATSMSSRPLHRGRGRGFSGRPYSGDAHLRSVRDANLGLRRGEGGSFLNQTPHHQNPPYNPRPHPPPPPHHHRPQFRPYPPQFRPPPPQFRPHPMQFRPPPPSDHRPAFRPPQHLRPRPPDYRDWELAWTPPPPPHCERFKVLSYNILADYLALDHRTKLYFHIPRHILDWQWRKRSIIFELGLWSADILCLQEVDRFHELEEELKPKGYSGIWKMRTGNPVDGCAIFWRNSRFKLLYEECIEFNKLGLRDNVAQLCVLEFINQNGSLPSSLTGSSKVVVCNIHVLYNPNRGEIKLGQVRVLLDKAKAVSKLWNDAPVAICGDFNCTPKSPLYNFISEQKLDLSGIDRNKVSGQASATIHASKLYYGPNSSEISANGSVQATSTEGDKEDIEQNNSRLDTRDLDTKCHSLDNQHTQTVSDMSVNSCTNVDCGKESDAYAGKDTQETSVDHSKVSCEVGSIKEPNPSYSEGRIHIDHVNGDIHDITPVTFSAPEEVHSDATWLGSNEHIPNAVPTSNKELLIEESNLHVPEGNKHVEFDCAPTSLQEDDQSSKMRIDLESIDLDNIEISSTKPSSQTSVSCVFEDEDSPSHEEIDNDQNNSSSTSYLVDKLHHLSNITFPPDMKEKSFFDEMDKTIIGGESEDGSRFVSSLHNAGEVAFDLGSSMKSDLEKPYQSEELDSASNNLLLPVESIEMEDYLSPRQISESINSEQATYTPALWTPMEIETATGNADCTFLEHPLQLRSTYTEAMDCSGTRDPHGEPLVTSYNRRFLGTVDYIWRSEGLQTTRVLAPISKHAMQWTPGFPTKKWGSDHIALVTELAFLKDSTDTSNDVK*	853

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso14g1033	852	MobiDBLite	consensus disorder prediction	588	622	-	-
	Gso14g1033	852	SUPERFAMILY	DNase I-like	736	842	IPR036691	-
	Gso14g1033	852	MobiDBLite	consensus disorder prediction	91	127	-	-
	Gso14g1033	852	MobiDBLite	consensus disorder prediction	588	602	-	-
	Gso14g1033	852	Gene3D	Endonuclease/exonuclease/phosphatase	693	852	IPR036691	-
	Gso14g1033	852	Gene3D	Endonuclease/exonuclease/phosphatase	132	447	IPR036691	-
	Gso14g1033	852	MobiDBLite	consensus disorder prediction	1	138	-	-
	Gso14g1033	852	SUPERFAMILY	DNase I-like	151	361	IPR036691	-
	Gso14g1033	852	PANTHER	CARBON CATABOLITE REPRESSOR PROTEIN 4	38	842	-	-
	Gso14g1033	852	PANTHER	CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6	38	842	-	-
	Gso14g1033	852	Pfam	Endonuclease/Exonuclease/phosphatase family	162	363	IPR005135	GO:0003824
	Gso14g1033	852	MobiDBLite	consensus disorder prediction	394	413	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso14g1033	Gso-Chr14	16404087	16411954	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso14g1033	-		-	gmx:100810446	1622.45