Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1032 ATGTCAGGGAAAGGCGCAAAGGGTTTGATAACTGCTAAGGACAAAGATAAGAAAAAACCAATTTCTCGCTCCTCAAGAGCCGGTCTTCAGTTTCCTGTTGGACGCATTCATCGTCTTCTGAAGTCAAGGGTGACAGCACATGGAAGAGTTGGGGCAACAGCTGCAGTTTATTCTGCTGCCATCCTGGAGTATTTAACTGCAGAGGTGTTGGAGTTGGCTGGCAATGCGAGCAAGGATCTGAAGGTGAAGCGTATTACCCCAAGACATCTACAGCTTGCCATCCGTGGAGATGAAGAACTTGATACCCTCATCAAAGGAACAATAGCTGGTGGAGGTGTTATTCCTCATATCCACAAGTCCCTTATCAACAAATCTTCGAAGGAATGA 387 0.4625 MSGKGAKGLITAKDKDKKKPISRSSRAGLQFPVGRIHRLLKSRVTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1032 128 PRINTS Histone H2A signature 19 41 IPR002119 GO:0000786|GO:0003677|GO:0030527
Gso14g1032 128 PRINTS Histone H2A signature 49 64 IPR002119 GO:0000786|GO:0003677|GO:0030527
Gso14g1032 128 PRINTS Histone H2A signature 64 77 IPR002119 GO:0000786|GO:0003677|GO:0030527
Gso14g1032 128 PRINTS Histone H2A signature 78 92 IPR002119 GO:0000786|GO:0003677|GO:0030527
Gso14g1032 128 PRINTS Histone H2A signature 105 123 IPR002119 GO:0000786|GO:0003677|GO:0030527
Gso14g1032 128 MobiDBLite consensus disorder prediction 9 23 - -
Gso14g1032 128 CDD H2A 15 124 IPR002119 GO:0000786|GO:0003677|GO:0030527
Gso14g1032 128 MobiDBLite consensus disorder prediction 1 26 - -
Gso14g1032 128 PANTHER HISTONE H2A 2 127 IPR002119 GO:0000786|GO:0003677|GO:0030527
Gso14g1032 128 SUPERFAMILY Histone-fold 13 105 IPR009072 GO:0046982
Gso14g1032 128 Pfam C-terminus of histone H2A 98 127 IPR032454 -
Gso14g1032 128 ProSitePatterns Histone H2A signature. 27 33 IPR032458 -
Gso14g1032 128 SMART h2a4 8 128 IPR002119 GO:0000786|GO:0003677|GO:0030527
Gso14g1032 128 Gene3D Histone, subunit A 8 128 IPR009072 GO:0046982
Gso14g1032 128 Pfam Core histone H2A/H2B/H3/H4 12 96 IPR007125 GO:0003677
Gso14g1032 128 PANTHER HISTONE H2A 2 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1032 Gso-Chr14 16400391 16402778 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1032 K11251 - gmx:100500629 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1032 14 16400391 16402778 Gso14g1032 14 16400391 16402778 ECH