Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0846 ATGGCTTTGCGGCTTTTGGTATCGCGGGTTGCAAGACGACAGATTAAAAGTGTGTTTGCTACAAGCTATTTTTCTGTCAATAAGCTTGGAGATCGTGCAGGAAATAGACTTTTGGGTGCTCAAGAGAGATTTCAATCTAGCTACCTTGGCAGTATTGCTCGTCGAGCACGTGATGCAGATGAAGCCGCTGAAGTTGCTTATCTCAAAGAACTTTACCATCAGAATGATCCTGAGGCTGTGATTAGAGTATTTGAAAGCCAGCCATCTCTGCACAATAGTCCCTCAGCTCTATCTGAATACGTAAAAGCATTGGTGAAAGTTGATAGGCTTGATGAAAGTGAATTACTGAAGACATTAAGGAGAGGCATGTCCAATTCAGTGACTGAGGAAAAAACTGTAGGTGGTCTTTCTGCTTTAAGAAATTTGGGAAAATCAACAAAAGACAATACTATTGGAACTGCTAGTAATCCAATTCATATGGTGGCTAGAGAAGGTGGGAATATAAAAGATCAGCTATGGCGTACATTTAGGTTCATTGTGGTGTCCTTTTTCATGATTTCTGGTGTAGGAGCACTCATTGAAGATAAAGGAATTAGTAAAGGACTTGGTATAAATGAAGAAGTGCAACCTAGCATGGAATCAAGTACAAAATTTAGTGATGTAAAAGGTGTCGATGAGGCAAAGGAAGAGCTGGAAGAAATTGTTCACTACCTTCGAGATCCTAAGCGCTTTACTCGTCTTGGTGGTAAGCTTCCAAAAGGAGTTTTGCTTGTTGGTCCACCTGGCACTGGAAAAACTATGTTAGCAAGAGCTATTGCTGGAGAGGCTGGGGTTCCATTCTTCTCCTGCAGTGGTAGTGAATTTGAAGAGATGTATGTTGGTGTTGGTGCACGAAGGGTGAGGGATCTTTTTTCTGCTGCAAGGAAGCGAGCACCTGCTATAATATTCATTGATGAGATAGATGCTATTGGAGGAAAACGAAATGCAAAGGACCAAATGTACATGAAGATGACGTTAAATCAGTTACTGGTTGAGCTAGATGGATTCAAGCAAAATGAGGGCATAATTGTGATTGGTGCTACTAATTTTCCACAATCATTGGATAACGCATTGGTGAGACCTGGGCGGTTTGATCGCCATGTTGTTGTTCCCAATCCTGATGTAAAAGGAAGACAACAGATTTTGGAATCACACATGTCAAAGGTTCTGAAGGCTGATGATGTTGATCTAATGATCATTGCCCGAGGAACACCGGGGTTCTCTGGTGCTGACCTTGCAAACTTGATTAACATTGCTGCTATCAAGGCGGCAATGGATGGTGCTAAAGCTGTGAGCATGGCTGATTTAGAGCATGCAAAAGACAAGATCCAGATGGGAAGTGAACGCAAGTCAGCTGTCATATCTGAGGAGTCACGGAAGTTGACTGCTTTCCACGAGGGTGGCCATGCCCTTGTGGCCATACATACTGATGGGGCCCTCCCTGTTCACAAGGCAACTATAGTTCCCCGTGGAATGGCTCTTGGCATGGTTACTCAATTGCCTGACAAGGACGAGACCAGCATTTCCCGTAAACAGATGCTTGCTACGCTTGATGTTTGCATGGGAGGTCGTGTCGCTGAAGAGCTAATTTTCGGAGAGAACGAAGTCACTTCTGGTGCATCCTCAGATCTCAGGAAAGCAACTAGTCTGGCAAGGGAGATGGTTACCGAATATGGCATGGGCAATGAAGTTGGACTAGTCACTCACGATTATGAAGATGATGGTAGGAGCATGAGCTCAGAGACTAGGCTTCTTATTGAGAAAGAGGTGAAGCAATTCCTGGAGAGGGCCTACAACAATGCAAAAACTATTCTGACCACTCACAACAAGGAGCTTCATGCACTTGCGAATGCCCTTCTGGAGCATGAAACCCTTTCAGGAACTCAGATAAAGGCATTGCTTGCCCAAGTTAGATCTCAGATGCAGCAGCAGCAGCCCCAAACACTTGAAGCTCAGAACAGTTCACAATCCAACACAGTGCCTCCATCATCTAGCAACCCGGCATCTGCTGCTGCTGCTGCTGCAGCTGCCGCCGCCACCACAGCCGCAGCTACAGCTACTGCTGCTGCCGCCAAGGCTAAAAGTGCTCCAGTGGGATCTTAG 2142 0.4519 MALRLLVSRVARRQIKSVFATSYFSVNKLGDRAGNRLLGAQERFQSSYLGSIARRARDADEAAEVAYLKELYHQNDPEAVIRVFESQPSLHNSPSALSEYVKALVKVDRLDESELLKTLRRGMSNSVTEEKTVGGLSALRNLGKSTKDNTIGTASNPIHMVAREGGNIKDQLWRTFRFIVVSFFMISGVGALIEDKGISKGLGINEEVQPSMESSTKFSDVKGVDEAKEELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMYVGVGARRVRDLFSAARKRAPAIIFIDEIDAIGGKRNAKDQMYMKMTLNQLLVELDGFKQNEGIIVIGATNFPQSLDNALVRPGRFDRHVVVPNPDVKGRQQILESHMSKVLKADDVDLMIIARGTPGFSGADLANLINIAAIKAAMDGAKAVSMADLEHAKDKIQMGSERKSAVISEESRKLTAFHEGGHALVAIHTDGALPVHKATIVPRGMALGMVTQLPDKDETSISRKQMLATLDVCMGGRVAEELIFGENEVTSGASSDLRKATSLAREMVTEYGMGNEVGLVTHDYEDDGRSMSSETRLLIEKEVKQFLERAYNNAKTILTTHNKELHALANALLEHETLSGTQIKALLAQVRSQMQQQQPQTLEAQNSSQSNTVPPSSSNPASAAAAAAAAAATTAAATATAAAAKAKSAPVGS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0846 713 MobiDBLite consensus disorder prediction 654 689 - -
Gso14g0846 713 Gene3D Peptidase M41 460 658 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gso14g0846 713 ProSitePatterns AAA-protein family signature. 355 373 IPR003960 GO:0005524|GO:0016887
Gso14g0846 713 Gene3D - 386 459 - -
Gso14g0846 713 SMART AAA_5 251 387 IPR003593 -
Gso14g0846 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 479 IPR027417 -
Gso14g0846 713 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 1 667 IPR005936 GO:0004176|GO:0004222|GO:0016020
Gso14g0846 713 Pfam ATPase family associated with various cellular activities (AAA) 255 384 IPR003959 GO:0005524|GO:0016887
Gso14g0846 713 Pfam AAA+ lid domain 407 450 IPR041569 -
Gso14g0846 713 SUPERFAMILY FtsH protease domain-like 466 650 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gso14g0846 713 CDD AAA 222 384 - -
Gso14g0846 713 MobiDBLite consensus disorder prediction 654 683 - -
Gso14g0846 713 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 4, MITOCHONDRIAL-LIKE 39 683 - -
Gso14g0846 713 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 207 647 IPR005936 GO:0004176|GO:0004222|GO:0016020
Gso14g0846 713 PANTHER METALLOPROTEASE M41 FTSH 39 683 - -
Gso14g0846 713 Pfam Peptidase family M41 466 645 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gso14g0846 713 Gene3D - 203 385 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0846 Gso-Chr14 9328474 9335586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0846 56 647 Miscellaneous Gene Families AT5G53170 51.954 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0846 K08955 - gmx:100776957 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0846 14 9328474 9335586 Gso14g0846 14 9328474 9335586 ECH