Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0665 ATGCCACAGCCAAATGTGCATGCTCTTTTAGAAAGTGAACCTTTGATGGATGAGGTGTTGCAAGGGCTTGATGCTGCAACCAGTTGTGTGGAAGATATGGATGAATGGTTAAGCATATTCAATGTAAAACTCCGGCACATGAGGGAGGATATTGCATCAATAGAAACCCGCAATAACAACCTGGAAATGCAATCAGTAAATAACAAATCTCTCATTGAAGAGCTTGATAAGCTTCTTGAGCGATTGCGTGTCCCTTCTGAGTATGCCACAAATTTGACTGGAGGTTCATTTGATGAAGCTCGAATGCTTCAAAATGTAGAAGCATGTGAATGGTTGACCAGTGCCTTGCGTGGTCTTGGAGTGCCTAATCTAGATCCTAGTTATGCAAACATGAGAACTGTTAAAGAGAAGCGTGCAGAACTTGAAAAATTAAAATCTACTTTTGTCAGGAGAGCCTCTGAATTCTTGAGAAATTATTTTGCTAGTTTGGTGGACCTCATGATAAGTGATAAAAGTTACTTTTCTCAGCGGGGGCAGTTAAAGAGGCCTGATCATGCTGACCTGCGGTACAAGTGCAGGACATATGCACGTCTTCTGCAACATTTGAAGAGTCTTGACAAGAATTGTTTGGGTCCACTGAGAAAAGCTTATTGCAGTTCTCTGAACTTGCTTCTTCGCAGGGAGGTCTGTTGCACTTCATGTTGGTTTTATTTGTTTCTTAATTGTCTGGCTTTCTTATTATGA 744 0.4113 MPQPNVHALLESEPLMDEVLQGLDAATSCVEDMDEWLSIFNVKLRHMREDIASIETRNNNLEMQSVNNKSLIEELDKLLERLRVPSEYATNLTGGSFDEARMLQNVEACEWLTSALRGLGVPNLDPSYANMRTVKEKRAELEKLKSTFVRRASEFLRNYFASLVDLMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREVCCTSCWFYLFLNCLAFLL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0665 247 Pfam Exocyst complex component Sec3 5 229 IPR019160 GO:0000145|GO:0006887
Gso14g0665 247 PANTHER SEC3/SYNTAXIN-RELATED 4 230 - -
Gso14g0665 247 Coils Coil 44 81 - -
Gso14g0665 247 PANTHER EXOCYST COMPLEX COMPONENT SEC3A-LIKE 4 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0665 Gso-Chr14 6627003 6631381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0665 5 229 EF-hand Containing Proteins AT1G47550 87.556 2.27e-141 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0665 K19983 - gmx:100812048 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0665 14 6627003 6631381 Gso17g2090 17 40596871 40611531 GST
Gso14g0665 14 6627003 6631381 Gso4g0305 4 2756414 2769685 PCT
Gso4g0305 4 2756414 2769685 Gso14g0665 14 6627003 6631381 PCT