Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0114 ATGGGAGAGGAAGAAGGTGGGCATGTTGATGTTGGTTTGTTCGAGACAAAAGAAGCAAGATTCAGAGGAGTTTACAAGGTATTTGCATCAACAATATTTGGCGCAATATGTTTAATTTGGATGTACAGAGTGGGAAACATCCCCACAGTTAAAAGTGGGAAGTGGGCTTGGATTAGTGTTATGGTGTCAGAGTTATGTTTTGGATTGTACTGGATCATCACTCAATCTGTTCGTTGGAGAATCCTTCAGCAAACGCCTTTCAAACACACACTCTCACAAAGATATGACGAGGAGAATTTACCAGCAGTGGACATTTTTGTGTGCACGGCTGACCCCATACTTGAGCCTCCATGCATGACGATTAACACGGTGTTATCAGCAATGGCATACAATTATCCTGCGAATAAATTGAGTGTGTATCTCTCTGACGATGGAGGCTCAGAGCTAACATTCTATGCTCTCTTAAAGGCCTCCATTTTCTCCAAACATTGGTTACCTTTCTGTAGAAGATTCAATGTTGAACCTATGTCACCAGAGGCTTTCTTCGCTGCCCCTCATTCTAGCAATAATAGCACTGAGTATGGCCAAGCATGGTTATTTATCAAGAAATTATACGAAGACATGAAAAATGAGATTGAATCAGCTGTAGCAAGGGGCAGGGTTCCAGATAATGTGAGGAATCAGCACAAAGGATTCTCAGAATGGAATCCAAAAACAACGAAGCAGGATCACCAACCTATCGTGAAGATTATAATTGACGGAAGAGACACAAATGCTGTAGATGAAGACAGATTTCAACTGCCAAGAGTCGTATACATGGCACGCGAAAAAAGACCCAACTACCCTCACCACTTCAAAGCTGGAGCTGTTAATGCACTGATAAGAGTGTCATCCGAGATAAGCAACGCCCCTTTCATTCTCAACTTGGATTGTGATATGTACCCCAATACTGCAAATACAATTCAAGAAATACTATGCTTCTTCTTGGATGAAACAAAAGGCCACGATATAGCTTATGTGCAATTTCCACAGAGCTATAATAACATCACCAAGAATGACCATTATGCAAATTCTTATCTTGTGAGCAGTAAGTTTGAGCTAGCTGGCATATGTGGATATGGAGCAGCCTTATTTTGTGGAACTGGGTGTTTTCATCGAAGAGAAAGTCTATCAGGAGCTTACTTGATAGATTACAAAGCAAAATGGGACATCAAGCCTAAAATAAATGATAATAGAACAATTAACGAATTGAATGAAGCATCGAAGGCTCTTGCCACTTGCACCTATGAGGAGGGAACTCAATGGGGGAAAGAGAAGGGATTAGTATATGGTATTCCTGTGGAAGACATAGCTACTGGCCTTGTAATCTCATGCAGGGGTTGGAAATCGATTTATTACAACCCAGAAAGGAAGGCTTTTGTGGGCATAGCTCCAACAACCTTGGATGTAGCATGTCTTCAACATATGAGGTGGTCAGAAGGCATGTTCCAAGTTTTCTTCTCCAAGTATTGCCCTTTCATTTATGGGCATGGGAAGATACACTTTGGTGTACAAATGGGATATTGCAATTACCTTTTATGGGCTCCTATGTCTCTGCCTACTCTCTGTTATGTCTTTGTTTCTCCTATTTGCCTACTTCGTGGCATTCCACTGTTCCCACAGCTTTCAAGCATATGGGTCCTTCCATTTGCATATGCATTTCTCGCTACATATGGCTTTAGCTTGTGTGAGTATTTGATTTGTGGGTCCACGGCAAAGGGTTGGTGGAACTTGCAAAGAATTAAATTCATCCATAGGACCACCTCGTATCTCTTTGGTTTCATTGACACCATGAAAAAGCAATTAGGACTGTCACAGACAAAATTTGTCATCACGGATAAAGTGGTTACTAAGGATGTCCAAAAGAGGTATGAGCAAGAGGTCATTGAATTTGGAGGCTCTTCAATCATGTTAACCATATTAGCTACAGTGGCATTGCTAAATCTTTTTGGTCTCCTTTGGGGAATGAAGAGGATTATGATGGATTTGGAATTCAGCTCTAGCCAATTGATGATGCAGATTACACTGAGTTCATTGGTGGTAATGATCAGTTTACCAGTGTATGAGGCACTTTTCATTCGTAGTGATAAAGGTTGCATACCATCTTCAGTTATGCTCAAGTCCATTGTCTTGGCTTCATTAGCCTGTTTCCTAGCACCTTTCATTTGCTAA 2211 0.4107 MGEEEGGHVDVGLFETKEARFRGVYKVFASTIFGAICLIWMYRVGNIPTVKSGKWAWISVMVSELCFGLYWIITQSVRWRILQQTPFKHTLSQRYDEENLPAVDIFVCTADPILEPPCMTINTVLSAMAYNYPANKLSVYLSDDGGSELTFYALLKASIFSKHWLPFCRRFNVEPMSPEAFFAAPHSSNNSTEYGQAWLFIKKLYEDMKNEIESAVARGRVPDNVRNQHKGFSEWNPKTTKQDHQPIVKIIIDGRDTNAVDEDRFQLPRVVYMAREKRPNYPHHFKAGAVNALIRVSSEISNAPFILNLDCDMYPNTANTIQEILCFFLDETKGHDIAYVQFPQSYNNITKNDHYANSYLVSSKFELAGICGYGAALFCGTGCFHRRESLSGAYLIDYKAKWDIKPKINDNRTINELNEASKALATCTYEEGTQWGKEKGLVYGIPVEDIATGLVISCRGWKSIYYNPERKAFVGIAPTTLDVACLQHMRWSEGMFQVFFSKYCPFIYGHGKIHFGVQMGYCNYLLWAPMSLPTLCYVFVSPICLLRGIPLFPQLSSIWVLPFAYAFLATYGFSLCEYLICGSTAKGWWNLQRIKFIHRTTSYLFGFIDTMKKQLGLSQTKFVITDKVVTKDVQKRYEQEVIEFGGSSIMLTILATVALLNLFGLLWGMKRIMMDLEFSSSQLMMQITLSSLVVMISLPVYEALFIRSDKGCIPSSVMLKSIVLASLACFLAPFIC* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0114 736 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN CSLE 8 731 - -
Gso14g0114 736 Pfam Cellulose synthase 103 392 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gso14g0114 736 Pfam Cellulose synthase 413 730 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gso14g0114 736 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 238 401 IPR029044 -
Gso14g0114 736 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 184 IPR029044 -
Gso14g0114 736 SUPERFAMILY Nucleotide-diphospho-sugar transferases 250 502 IPR029044 -
Gso14g0114 736 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 8 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0114 Gso-Chr14 1013963 1022551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0114 13 735 Glycosyltransferase AT1G55850 46.639 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0114 - - gmx:100816849 1513.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2737 8 45066750 45072335 Gso14g0114 14 1013963 1022551 PCT
Gso14g0114 14 1013963 1022551 Gso8g2737 8 45066750 45072335 PCT