Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1620 ATGAAAAGGGTAATGTTACTGGTATTGTCATGCCTATGGATCGAATCATTATTGACCGTGGTCCGGGGTGAAGACCCGTATCTCTACTTTACATGGAATGTTACTTACGGCACCATCTCTCCATTGGGTATACCCCAACAAGGCATTTTCATCAATGGCCAATTTCCAGGACCCAATATCAATTCCACCAGCAACAACAATCTAGTTATCAATGTCTTCAATAATCTTGATGAGCCATTCCTTTTCACTTGGAATGGCATCCAACACAGAAAGAATTCATGGCAAGATGGGGTTGCAGGAACTAACTGCCCCATTCCTCCAGGGACAAACTTCACGTATCGTATCCAGGTGAAGGACCAAATAGGCAGTTACTTCTACTACCCAAGCACAGCCATGCATAGGGCAGCTGGTGGTTTTGGTGGCCTTCGTGTAAACAGTCGCTTGCTTATTCCTGTGCCTTACCCAGATCCTGAGGATGAATACACCGTTCTCATTGGTGACTGGTACACAAAGAGTCACACCATTCTGAGGAAGTTATTGGATAGCGGGCGCTCTCTTGGTAGGCCTGAAGGTGTCCTTATCAATGGCAAAACAGCTAAAGGTGATGGAAAAGACGAACCACTCTTCACCATGAAGCCTGCAAAGACCTACAAATATAGAATATGCAACGTTGGCCTTAAGAACTCCCTAAACTATAGGATCCAAGGCCATTCCATGAAGCTTGTCGAGATGGAAGGCTCCCACGTGGTGCAAAACATGTACGACTCTCTTGATGTGCATGTAGGGGAATGTTTTTCTGTGCTTGTTACAGCGGACAAGGAACCAAAGGATTACTACATGGTGGCTTCCACACGTTTCACCAAGACTGTTCTAATAGGTAAAGGTATCATTCGTTACACAAATGGTAAGGGTCCTGCCTCACCCGACATCCCCCCGGCTCCAGTGGGTTGGGCTTGGTCTCTTAACCAATTCCATACCTTCCGTTGGAATCTCACTGCTAGTGCCGCCAGGCCCAACCCTCAGGGTTCCTACAAATATGGTCAAATCAACATTACTCGTACTATCAAGCTCGTTAACTCAGTTAGTAAGTCTAACGGTAAGCTTCGTTATGCCCTTAATGGTGTCTCACATGTCGATCCCGAAACTCCACTCAAGCTAGCTGAATACTTTGGAATTTCGGACAAGGTTTTCAAATATGATACTATCCCAGACAACCCATCACCTAACATTGGAAACGCTGTAACCGTACAACCAAATGTTCTTAACATTACCCATCGCAACTTCATCGAAATCATCTTTGAGAACCCTGAAAAAACAATCCAATCATATCACTTGGATGGTTATTCGTTCTTCGTACTCGGCATAGAGCCAGGCACTTGGACCCCAGAGAAGAGGAAGTCCTACAACCTTCTAGATGCCGTGAGCAGACACACAGTTCATGTGTTCCCAAAATGTTGGGCCGCCATCATGTTGACATTCGACAATGCTGGGATGTGGAACCTAAGATCGGATATTGCTGAAAGTCGCTATCTTGGCCAGCAGTTATACATTAGTGTTTTGTCCCCTGAGCATTCTCTTAGAGACGAGTACAATATGCCAGACAGTAACTTGCTTTGTGGTCTTGTAAAGAATTTGCCAAAACCAGCACCATACTCCTAA 1659 0.4521 MKRVMLLVLSCLWIESLLTVVRGEDPYLYFTWNVTYGTISPLGIPQQGIFINGQFPGPNINSTSNNNLVINVFNNLDEPFLFTWNGIQHRKNSWQDGVAGTNCPIPPGTNFTYRIQVKDQIGSYFYYPSTAMHRAAGGFGGLRVNSRLLIPVPYPDPEDEYTVLIGDWYTKSHTILRKLLDSGRSLGRPEGVLINGKTAKGDGKDEPLFTMKPAKTYKYRICNVGLKNSLNYRIQGHSMKLVEMEGSHVVQNMYDSLDVHVGECFSVLVTADKEPKDYYMVASTRFTKTVLIGKGIIRYTNGKGPASPDIPPAPVGWAWSLNQFHTFRWNLTASAARPNPQGSYKYGQINITRTIKLVNSVSKSNGKLRYALNGVSHVDPETPLKLAEYFGISDKVFKYDTIPDNPSPNIGNAVTVQPNVLNITHRNFIEIIFENPEKTIQSYHLDGYSFFVLGIEPGTWTPEKRKSYNLLDAVSRHTVHVFPKCWAAIMLTFDNAGMWNLRSDIAESRYLGQQLYISVLSPEHSLRDEYNMPDSNLLCGLVKNLPKPAPYS* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1620 552 Pfam Multicopper oxidase 385 522 IPR011706 GO:0005507|GO:0016491
Gso13g1620 552 SUPERFAMILY Cupredoxins 20 173 IPR008972 -
Gso13g1620 552 CDD CuRO_2_AAO_like_1 159 299 IPR034271 -
Gso13g1620 552 PANTHER L-ASCORBATE OXIDASE-LIKE PROTEIN 3 544 - -
Gso13g1620 552 CDD CuRO_1_AAO_like_1 28 145 IPR034273 GO:0005507
Gso13g1620 552 Gene3D - 347 545 IPR008972 -
Gso13g1620 552 Gene3D - 28 148 IPR008972 -
Gso13g1620 552 Pfam Multicopper oxidase 33 147 IPR011707 GO:0005507
Gso13g1620 552 PANTHER MULTI-COPPER OXIDASE 3 544 IPR045087 -
Gso13g1620 552 SUPERFAMILY Cupredoxins 155 338 IPR008972 -
Gso13g1620 552 Pfam Multicopper oxidase 160 300 IPR001117 -
Gso13g1620 552 Gene3D - 157 337 IPR008972 -
Gso13g1620 552 SUPERFAMILY Cupredoxins 348 539 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1620 Gso-Chr13 31409926 31412076 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1620 K00423 - gmx:100782413 1144.41