Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1614 ATGATTTCCAATCCCATGTTAATGTTACTAGTTGTGGTACTGCTGGTGGTTGGTTTTGCAAAGTCAGATTTAAGTAAGGACAGAGAAGAATGTGCAGACAAACTAATTGACCTAGCTAGCTGTGTTCCTTACGTTGGTGGTGAAGCCAAAACCCCCACCATAGATTGCTGCACTGGTCTCAAAGCGGTTCTTGACCGGAGCAAGAAATGCCTCTGCATCCTCATCAAAGATCGCGACGACCCCAATCTTGGCATCAAGATCAATGCTACTCTCGCTATTCAGCTACCCTCTGCTTGCCACTCACCTGCTAATATTACTCAGTGTGTAGATCTTTTGCATTTAGCACCTAACTCTCCTGATGCTAAGGTGTTTGAGGGATTCCAAAAATCTGCCAAAACAAACAGCTCCACCCCAGTTTCAGTTTCCAGTGGTGCTGAGAAGGGATCAAGCTCAAGTGCTCAGGAAAAGAGTGGTGCTGTCTCCACAATTACAAAGGCACACCACCTGTTTTACTCTATCTTACCATTACCATTATTATTTCTTGTTTGA 549 0.4426 MISNPMLMLLVVVLLVVGFAKSDLSKDREECADKLIDLASCVPYVGGEAKTPTIDCCTGLKAVLDRSKKCLCILIKDRDDPNLGIKINATLAIQLPSACHSPANITQCVDLLHLAPNSPDAKVFEGFQKSAKTNSSTPVSVSSGAEKGSSSSAQEKSGAVSTITKAHHLFYSILPLPLLFLV* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1614 182 MobiDBLite consensus disorder prediction 132 154 - -
Gso13g1614 182 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 109 IPR036312 -
Gso13g1614 182 CDD AAI_LTSS 38 100 - -
Gso13g1614 182 SMART aai_6 31 108 IPR016140 -
Gso13g1614 182 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 8 163 IPR043325 -
Gso13g1614 182 Pfam Probable lipid transfer 12 108 IPR016140 -
Gso13g1614 182 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 8 163 - -
Gso13g1614 182 Gene3D - 28 108 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1614 Gso-Chr13 31360601 31361475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1614 3 157 Acyl Lipid Metabolism Gene Families AT1G55260 49.375 2.38e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1614 - - gmx:100305590 324.709