Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1598 ATGTCGGCAATTCCTATCAGTTCCAGCTATGCTTCCACCTTCTCTTATTCTGCTGCTCATGCTCTTCCTTTCTTCTTTGCTCGCAACAACTACTCCACCAGGATCAATCTTCATCCACCTGTCTTTTGCCAACTTCAATCCGAGACAGAGAAACCGCTGACAAGAAGGTGTTCCCCCTTTCTAGAAAGTTCATTACTCTCTGGTAATGGTGGTGTGGCCTCAAACGAGTGGAAAGCTGTTCCTGATATTTGGAGATCTTCTGCTGAGAAGTATGGTGATAAAATAGCATTAGTAGATCCGTATCATGATCCTCCTTCAACTATGACATATAAACAGTTGGAGGATGCAATATTGGACTTTGCTGAAGGATTGAGAGTTATTGGAGTAAGACCCAATGAGAAGCTTGCGCTTTTTGCTGATAATTCATGTCGCTGGCTTGTAGCAGATCAAGGTATGATGGCATGTGGGGCAATCAATGTGGTAAGGGGTTCGAGGTCATCAATTGAAGAACTGCTGCAAATATACAACCACTCTGAAAGTGTTGCACTAGCTGTGGACAATCCTGAAATGCTTAATCGGATTGCAAAACTGTTTTATTTGAAGGCTTCAATGAGATTTATTATTCTGCTGTGGGGAGAAAAATCAGGCCTGGTCAGTGAAGGAGACAAGGAGGTGCCTGTCTTTACTTTCACAGAAGTCATACATTTGGGACAAGAGAGTCGCAGAGTATTGTTTGATTCTCTTGATACTAGGAAGCACTATATGTATGAAGCAATCAAATCTGATGACATTGCTACTCTTGTATACACAAGTGGAACTACTGGAAATCCGAAAGGTGTTATGCTAACCCATCAGAATCTTTTGCATCAGATAAAAAACTTAGGGGATATTGTACCTGCTGAAGTTGGGGATAGATTTCTAAGCATGCTGCCTTCCTGGCATGCATATGAAAGAGCTTGTGAGTATTTCATTTTCTCGTGCGGTGTTGAACAAGTATACACAACTGTGAGAAACTTGAAGGAGGATTTGGGACATTATCAACCACATTACTTGATTTCTGTTCCTTTAGTTTATGAAACTTTATATAGTGGGATCCAGAAGCAGATATCTACAAGCTCCCTTGTTAGAAAGCTTGTTGCACTCACATTCATAAGGGTCAGCTTAAGGTACATGGAGTGTAAGCGTATTTATGAGGGTAAATGTCTAACAAAGGATCAGAAGCCACCGTCCTACCTCCATTCAATTTTGGACTGGTTATGGGCAAGAGTTGTTGCCACAATATTATTTCCAGTTCATTTACTGGCGAAGATACTGGTCTACCGTAAAATTCATTCAGCTATTGGAATTTCAAAGGCTGGAGTAAGTGGCGGTGGTAGCTTATCTTCTCATGTGGATAGATTTTTTGAGGCTATTGGTGTGAATGTGCAGAATGGATATGGTTTAACTGAAACTTCACCAGTTATTGCTGCCCGACGGCTTAGTTATAACGTTATTGGGTCTGTTGGCCATCCAATTAAGCATACAGAATTCAAAGTCGTAGATTCTGAGACTGATGAAGTTCTTCCACCTGGTTCAAAGGGAATATTAAAAGTCAGGGGCCCACAATTGATGAAGGGATACTATAAGAATCCTTCAGCTACAAATCAGGTCTTAGATAGGGATGGCTGGCTGAATACTGGGGATATTGGTTGGATTGTTCCCCACCATTCAACTGGGCGGAGTCGTAATTCCAGCGGAGTAATTGTTGTGGATGGCCGTGCTAAGGACACTATTGTGCTTTCTACAGGTGAAAATGTTGAACCAGGAGAACTTGAAGAAGCTGCCATGAGGAGTAGCCTCATACATCAAATTGTTGTTATTGGCCAGGATAAGCGACGTCTGGGGGCTGTAATTGTTCCTAACAAAGAAGAAGTCTTAAAGGCGGCAAGGGAATCGTCAATTATAGATTCGAACAGTTCAGATGCCAGTCAAGAAAAAGTGACCAGCCTAATATATAAAGAATTGAGGACATGGACTTCAGAATCTCCGTTTCAAATTGGGCCAGTCCTTCTCGTAAATGACCCCTTCACGATTGATAATGGGCTAATGACACCCACTATGAAAATTCGAAGGGATAAAGTTGTGGCTCAATACGGGGACCAAATAGAGAATCTATACAAGTAA 2163 0.417 MSAIPISSSYASTFSYSAAHALPFFFARNNYSTRINLHPPVFCQLQSETEKPLTRRCSPFLESSLLSGNGGVASNEWKAVPDIWRSSAEKYGDKIALVDPYHDPPSTMTYKQLEDAILDFAEGLRVIGVRPNEKLALFADNSCRWLVADQGMMACGAINVVRGSRSSIEELLQIYNHSESVALAVDNPEMLNRIAKLFYLKASMRFIILLWGEKSGLVSEGDKEVPVFTFTEVIHLGQESRRVLFDSLDTRKHYMYEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKNLGDIVPAEVGDRFLSMLPSWHAYERACEYFIFSCGVEQVYTTVRNLKEDLGHYQPHYLISVPLVYETLYSGIQKQISTSSLVRKLVALTFIRVSLRYMECKRIYEGKCLTKDQKPPSYLHSILDWLWARVVATILFPVHLLAKILVYRKIHSAIGISKAGVSGGGSLSSHVDRFFEAIGVNVQNGYGLTETSPVIAARRLSYNVIGSVGHPIKHTEFKVVDSETDEVLPPGSKGILKVRGPQLMKGYYKNPSATNQVLDRDGWLNTGDIGWIVPHHSTGRSRNSSGVIVVDGRAKDTIVLSTGENVEPGELEEAAMRSSLIHQIVVIGQDKRRLGAVIVPNKEEVLKAARESSIIDSNSSDASQEKVTSLIYKELRTWTSESPFQIGPVLLVNDPFTIDNGLMTPTMKIRRDKVVAQYGDQIENLYK* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1598 720 Gene3D Luciferase; Domain 3 495 565 - -
Gso13g1598 720 PANTHER LONG-CHAIN-FATTY-ACID COA LIGASE (AMP-FORMING) 2 720 - -
Gso13g1598 720 SUPERFAMILY Acetyl-CoA synthetase-like 76 719 - -
Gso13g1598 720 Gene3D - 588 716 IPR045851 -
Gso13g1598 720 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 2 720 - -
Gso13g1598 720 Gene3D - 74 393 IPR042099 -
Gso13g1598 720 ProSitePatterns Putative AMP-binding domain signature. 267 278 IPR020845 -
Gso13g1598 720 Pfam AMP-binding enzyme 86 593 IPR000873 -
Gso13g1598 720 Gene3D - 451 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1598 Gso-Chr13 31227706 31238991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1598 44 720 Acyl Lipid Metabolism Gene Families AT3G23790 71.239 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1598 K01897 - gmx:100782583 1417.91