Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1579 ATGGCGGATTGGGGTCCAGTGGTGATAGCAGTGGTGCTGTTTGTGTTGCTAAGCCCTGGTCTTGTGTTTCAATTGCCAGGGAAGAGCAGAGTGGTGGAGTTTGGGAACATGCAAACCAGTGCAGTGTCTATCTTGGTCCACACAATCATCTTCTTTGGTCTCATTACCATCTTTCTTGTTGCTATTGGTGTGCATATCTACACTGGCTAG 210 0.4762 MADWGPVVIAVVLFVLLSPGLVFQLPGKSRVVEFGNMQTSAVSILVHTIIFFGLITIFLVAIGVHIYTG* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1579 69 PANTHER OS05G0103400 PROTEIN 1 69 IPR021775 -
Gso13g1579 69 PANTHER OS05G0103400 PROTEIN 1 69 - -
Gso13g1579 69 Pfam Protein of unknown function (DUF3339) 1 67 IPR021775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1579 Gso-Chr13 31090876 31091883 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1579 - - gmx:100787382 129.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g1579 13 31090876 31091883 Gso5g1264 5 36185987 36186662 PCT
Gso13g1579 13 31090876 31091883 Gso8g0878 8 8156523 8158719 PCT
Gso5g1264 5 36185987 36186662 Gso13g1579 13 31090876 31091883 PCT
Gso8g0878 8 8156523 8158719 Gso13g1579 13 31090876 31091883 PCT