Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1558 ATGGGTTCATTCCAGACACCCATTGGAATGAGAAGTTCAACATTGCTAGAGACTTCATGTGGATTCCTGTTGCAGGAACTGCAGATAATATGGGATGAAGTTGGAGAAGATAAGTTTGAAAGGGAGAAAGTTCTGTTAGATTTGGAGCAAGAGTGCCTTGAGGTTTACAGAAGAAAAGTTGACAGAGCAAATATATCTAGAGCTCATCTGCATCAGGAATTGGCCGAGGCTGAGGCTGAATTTACCCACCTTCTTTTGTCCCTTGGTGAACGATCTCTACCAGTCCGGCCAGAGAAAAGGGCAGGTTCACTAAAAGAGCAGCTAGATTCAATCACTCCAGCACTTCGGGAAATGCGTCTGAGGAAAGAAGAGAGGTTAAACCAATTCCGAACTGTGCAAGGTCAAATTCAAAAAATTTCTGCTGAAATTGCAGGTAACTCAGACAATGAACCCTCATCCATTGTTGTAAATGAGAATGATCTTTCACTAAAAAGGCTTGAGGAGTATCAGAATGAGTTGCAGAGACTTCACAATGAGAAGAATGAAAGACTCCAGCAAGTGGAGAAATACATAGACATAATACACAGCTTGTCCACGATCTTGGGAAAGGATTCTTCGGCAATCATCATGGAAGTTCATCCAAGCTTAAATGATTTGTGTGGAATAACAAAAAATATAAGCGACACAATCTTAGATAAACTCAATATCACGGTGGAGTCCCTTTTTGAAGAAAAGCAAAATCGGCTGGAAAAGCTTCACCATTTAGGCAAAGCACTGTCTAATCTATGGAATCTTATGGACACACCATACAGTGAGCGACAATCTTTTTCCCATGTAATCAATTTGTTGTCGCTCTCATCTGCAGAAGTAACAGATCCGGGAAGTCTTACTCTGGAAATAGTCCAGCAGACTGAAGCTGAAGTAAAGAGACTGGATCAACTAAAAGCAAGCAAGATGAAGGAGCTATTCCAGAAGAAACAGGAGGAACTGGAGTTGATATGCAAGAAATCACATGTGGAGATTCCTTCAAGGGAAGAGATGAATAATATAATTAACCTCATAAACTCAGGGGAGATTGATCATTCTGATCTCCTCCTGAGCATGGATGAACAGATATCTAGAGCAAAAGAAGAGGCTTCTAGCAGGAAGGCTATCATGGAGAAAGTGGAGAAGTGGATGTTAGCATGTGATGAGGAGCGCTGGCTAGAAGAATATAGCAGGGATGAGAATCGATACTCAGTCAGTAGAGGAGCTCACAAAAACTTGAGACGTGCTGAACGTGCCCGTATAATGGTCAGCAGAATGCCAGCTCTGGTAGATTTGCTAATAAAAATGACTAGGAGTTGGGAAGAAGAAAGAAATAAAGTTTTCTTGTATGATCAGGTACCTCTAATGGCCATATTGGAAGAATATAACATCCTAAGACGAGAAAGGGAGGAGGATACAAAAAGACAGCAGCCGTGGGAGAAAAAGAGGATTCAAAGCCAAGTAGTTGAGCGAGATAATACTTATGTGTCAAGACCCGGCACCAGCAGCCGGCGTCTTCCAAGTAGAAGCATGAATGGAGCTCTAGACAGTTCTGCGGTCCTGAACAGAAGACTTTCTATGGGAATACAACAGCTGGGATCCAACAGCATAAATTCGGGAAATCACGGCTTGTCCTTCATTAAGGATGGAAGGAATGCCCTAAGAAAAAAGATTTATGGCGAACCCACCTTCACTTCTCCTACAAGAGATGGGGCATCTTCTGCGGTGTCAACACATTCTATATTGTTTTCCCCTTAA 1785 0.4218 MGSFQTPIGMRSSTLLETSCGFLLQELQIIWDEVGEDKFEREKVLLDLEQECLEVYRRKVDRANISRAHLHQELAEAEAEFTHLLLSLGERSLPVRPEKRAGSLKEQLDSITPALREMRLRKEERLNQFRTVQGQIQKISAEIAGNSDNEPSSIVVNENDLSLKRLEEYQNELQRLHNEKNERLQQVEKYIDIIHSLSTILGKDSSAIIMEVHPSLNDLCGITKNISDTILDKLNITVESLFEEKQNRLEKLHHLGKALSNLWNLMDTPYSERQSFSHVINLLSLSSAEVTDPGSLTLEIVQQTEAEVKRLDQLKASKMKELFQKKQEELELICKKSHVEIPSREEMNNIINLINSGEIDHSDLLLSMDEQISRAKEEASSRKAIMEKVEKWMLACDEERWLEEYSRDENRYSVSRGAHKNLRRAERARIMVSRMPALVDLLIKMTRSWEEERNKVFLYDQVPLMAILEEYNILRREREEDTKRQQPWEKKRIQSQVVERDNTYVSRPGTSSRRLPSRSMNGALDSSAVLNRRLSMGIQQLGSNSINSGNHGLSFIKDGRNALRKKIYGEPTFTSPTRDGASSAVSTHSILFSP* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1558 594 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 8 594 IPR007145 GO:0000226|GO:0008017
Gso13g1558 594 Gene3D - 372 506 - -
Gso13g1558 594 Coils Coil 301 321 - -
Gso13g1558 594 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 519 - -
Gso13g1558 594 MobiDBLite consensus disorder prediction 500 521 - -
Gso13g1558 594 Coils Coil 60 80 - -
Gso13g1558 594 MobiDBLite consensus disorder prediction 571 594 - -
Gso13g1558 594 Coils Coil 159 190 - -
Gso13g1558 594 MobiDBLite consensus disorder prediction 575 594 - -
Gso13g1558 594 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 8 8 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1558 Gso-Chr13 30935780 30939960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1558 12 515 EF-hand Containing Proteins AT5G62250 39.105 2.12e-97 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1558 K16732 - gmx:100791080 1129.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0062 18 522619 526931 Gso13g1558 13 30935780 30939960 GST