Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1545 ATGATAGCTTGTGATGGTTGTGGAGTTTTTGGCTTTTGCGTGTTCATGATTGGTTTGCTCTTTTTTTACAGATCACTCTTTAGCCTCCAGTCTTCTTGTTCTTGGCTTTTAAATTTTAGTGTCATGGGGTTTCTAAGGTTTATAAGAAGGTATAGTTTCCCCTTCAAGGACAAAACTCGAAATAGAGCATATGCACTTCAGCATATGCAAAGCAGAGGCTTCTCAAAGGATGGAGTTCTTAATGGTATTAATTGCACAGTTTTGGAGAGAAACAAGGCATTTTCAAAACATCCACAAGCACACTTCATCAACAATCGATCCATGGAGATATTCCGCAAAATTGATGGCCTTGTTGAAGAGATCCAAAGGTCTCAACCACCAGTAGATTTATGGAGGAAATTTATATATTGTACTTCCCTCTCTGGTTCAATTCTTGGATCGGTTGATCACATACAACCTCAAGATCTTGAGCATTTTGTCAGCCCGGTCTCTGTTGCACACTTCTCGCAGTACAAGCTAACTATGTTACTACTCAAGCGACTTGAAAACCTAGGCTTCCAAATATGTGCGCCTGAAAGTTTGGAAGGAAATGAACAGTCTTGTGAGAAAAAAATAATGATGGGCCATGAGTGTGTTTCCATTGATGCCAGCAATGACTTTGTAACAGTAACTGCATCTTCTATCATTAAAGGGAAGCGTGTAGAACAGAACATTCACTGTAACATCCTTATTGGTACAGATGGTGCAGGAAGTACTGTAAGAAAGCTTGTAGGAATAGAAATGAGAGGTGAAAAGGACTTGCAAAAACTTGTTAGTGTCCATTTCTTTAGCAAAGACCTTGGACAGTTTTTGCTTAAGGAGAATCCTGGTATGCTTTTTTTTATCTTCAATGCTGAAGCTATTGGGGTCCTTGTTGCTCATGATCTCAGGCAAGGGGAATTTGTATTGCAGATACCCTTTTATCCACCTCAGCAAACAATTGAGGATTTCAATCCAAAGGCATGTGAGAAATTAATCAGCAAACTTGTTGGTCGGGAGTTTGGAGATGTAGATGTAATTGATATAAAGCCATGGGTTATGCATGCTGAAGTTGCTGAGAGGTTTATATGTAGTGGCAACCGAATATTACTTGCTGGTGATGCTGCTCATCGATTTCCTCCTGCTGGTGGATTTGGAATGAATACTGGCATTCAGGACGCGCATAATCTTGCCTGGAAAATTGCTTCTGTGATTAAGGGTATTGCCCCAACTTCAATGCTAAATACCTACGAAATTGAACGTAAACCGATTGCTTTATTCAATACAAGATTAAGTCTAGAAAACTATAAAGCTGCCATGTCTGTTCCTGCTGCACTTGGTCTTGATCCAACTGTTGCAAACATAGTACATCAATTTATTGTTGATGGGATTGGTTCCATCTTACCATCTGGTTTGCAGAAGGTAGCTTTGGATGGAATTTTTGGTATAGGTCGTGCACAGGTTTCAGAATTTGTCCTAAATGAAAGTAACCCTCTTGGATCCTCAAGGTTGGCTAAGCTAAGACATATATTTGAAGAAGGAAAAAGCCTTCAACTTCAGTTCCCTGCTGAAGATCTTGGTTTTAGGTACCTACAAGGAGCACTTATGCCAGAGAGTAAAGATGTTGAAAGTCCTCCAGAAGTACTAACAGGGCGTCGGAGGGACTACACCCCTTCAGCACAACCAGGATCAAGACTGCCTCATATATTTGTGAGAGTAAACCCGTTAAGTGAGGAGACTGTTTCTACACTTGATCTTGTGTCGGGAGATAAAGTTGAGTTCATTCTCATCATAGCACCTGTGGAGGAATCTTATCATCTAGCTCGTGAAGCATTCAAGGTGGCTGAGGAACAAGAAATTTTTCTCAAAGTTTGTATTTTTTGGTCTACTGATTCTGTTGAAGGACTTGAGAAAGGAAGTAAAGCAGCATTATCACCTTGGAAGAATTACCTAGATGTTGTTGAAGTTTGGTCATCAACTTCAAATTGGTGGGATATGTGTAACATGACGAACAGAGGGGCTATTTTAGTTAGACCCGATGAACATATTGCCTGGCGTACAAGTTCAGGACTTGCTGGGGATCCTAGAGTGGAAATGCAGAGGGTTTTTTCTGCTATACTGGGAGTACACGGTTCAAATAAACAAATACACGGATGA 2175 0.4041 MIACDGCGVFGFCVFMIGLLFFYRSLFSLQSSCSWLLNFSVMGFLRFIRRYSFPFKDKTRNRAYALQHMQSRGFSKDGVLNGINCTVLERNKAFSKHPQAHFINNRSMEIFRKIDGLVEEIQRSQPPVDLWRKFIYCTSLSGSILGSVDHIQPQDLEHFVSPVSVAHFSQYKLTMLLLKRLENLGFQICAPESLEGNEQSCEKKIMMGHECVSIDASNDFVTVTASSIIKGKRVEQNIHCNILIGTDGAGSTVRKLVGIEMRGEKDLQKLVSVHFFSKDLGQFLLKENPGMLFFIFNAEAIGVLVAHDLRQGEFVLQIPFYPPQQTIEDFNPKACEKLISKLVGREFGDVDVIDIKPWVMHAEVAERFICSGNRILLAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIASVIKGIAPTSMLNTYEIERKPIALFNTRLSLENYKAAMSVPAALGLDPTVANIVHQFIVDGIGSILPSGLQKVALDGIFGIGRAQVSEFVLNESNPLGSSRLAKLRHIFEEGKSLQLQFPAEDLGFRYLQGALMPESKDVESPPEVLTGRRRDYTPSAQPGSRLPHIFVRVNPLSEETVSTLDLVSGDKVEFILIIAPVEESYHLAREAFKVAEEQEIFLKVCIFWSTDSVEGLEKGSKAALSPWKNYLDVVEVWSSTSNWWDMCNMTNRGAILVRPDEHIAWRTSSGLAGDPRVEMQRVFSAILGVHGSNKQIHG* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1545 724 SUPERFAMILY FAD/NAD(P)-binding domain 81 452 IPR036188 -
Gso13g1545 724 Pfam FAD binding domain 81 431 IPR002938 GO:0071949
Gso13g1545 724 Gene3D - 529 715 - -
Gso13g1545 724 PANTHER TRK SYSTEM POTASSIUM UPTAKE PROTEIN 82 711 - -
Gso13g1545 724 Gene3D - 81 431 IPR036188 -
Gso13g1545 724 Gene3D - 128 367 - -
Gso13g1545 724 MobiDBLite consensus disorder prediction 547 568 - -
Gso13g1545 724 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 239 254 - -
Gso13g1545 724 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 372 387 - -
Gso13g1545 724 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 387 403 - -
Gso13g1545 724 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 405 423 - -
Gso13g1545 724 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 423 439 - -
Gso13g1545 724 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 82 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1545 Gso-Chr13 30844916 30850537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1545 - - gmx:100794253 1441.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0076 18 647799 652317 Gso13g1545 13 30844916 30850537 GST