Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1539 ATGGGGCACTCTAAGGAAAATAGTGATGTTGCTGCCAAGCAGAAGGCAATTGATGATTGGCTTCCAGTCACTGGTTCCCGAACTGCCAAATGGTGGTCTTCAGCTTTCCACAATCTCACAGCAATGGTTGGTGCAGGTGTCCTCAGCCTTCCCTTTGCCATGTCAAATATGGGCTGGGGTGCCGGTTCCACCGTGCTTATCTTGTCATGGGTAATCACCCTCTACACCCTGTGGCAAATGGTTGAGATGCACGAAATGGTGCCCGGAAAAAGATTTGATAGGTACCATGAGTTGGGACAACATGCCTTCGGAGAAAAACTAGGTCTCTGGATTGTGGTTCCCCAACAAGTTGTTGTTGAAGTTGGCACGTGCATTGTCTATATGGTTACTGGGGGCAAGTCATTGAAGAAAGTTCATGATACCCTTTGTCCCGATTGCAAAGATATTAAGACCTCATATTGGATTGTTATCTTCGCTTCTGTGAACTTCGCTCTTGCGCAATGCCCCAACTTAAACGACATCTCTGCTATCTCTTTTGCTGCAGCTGTCATGTCTTTGATATACTCAACCATCGCTTGGTGTGCTTCTATAAACAAGGGGATTGACGCAAATGTGGATTATGGCTCCAGAGCCACTAGCACTGCTGATGCTGTATTCAACTTCTTTTCTGCCTTGGGTGATGTAGCATTTGCCTATGCAGGTCATAATGTGGTTTTGGAAATTCAAGCAACCATGCCTTCATCTGAAGATACACCTTCCAAGAAACCCATGTGGAGAGGAGTTATTTTGGCATACATAGGAGTTGCATTCTGCTACTTACCTGTTGCCTTCATTGGATACTATATGTTTGGAAACTCAGTTGATGATAACATCCTCATCACACTAGAACGCCCCGCTTGGCTCATTGCCGCTGCTAACCTTTTTGTCTTTGTCCACGTTGTTGGAGGCTACCAGGTGTTTGCCATGCCAGTGTTTGATATGATCGAAACCTGCATGGTTACAAAATTAAATTTTCCACCTTCTACTGCACTCCGAGTAACAACTCGCACTATTTATGTTGCGGTGACAATGTTAATTGGCATATGTGTTCCGTTCTTTGGCTCTCTTCTTGGATTTCTTGGAGGCTTTGCGTTTGCCCCGACATCATATTTTTTGCCCTGTATCATATGGCTTAAGCTTAAAAAGCCCAAGAAATTTGGCTTGTCTTGGACAATTAACTGGATCTGCATTATTCTTGGGGTAGTGTTGATGATATTATCTCCAATTGGTGCTCTAAGGAATATCATACTATCGGCCAAGAACTACAAGTTCTTCTCGTAG 1320 0.4424 MGHSKENSDVAAKQKAIDDWLPVTGSRTAKWWSSAFHNLTAMVGAGVLSLPFAMSNMGWGAGSTVLILSWVITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQVVVEVGTCIVYMVTGGKSLKKVHDTLCPDCKDIKTSYWIVIFASVNFALAQCPNLNDISAISFAAAVMSLIYSTIAWCASINKGIDANVDYGSRATSTADAVFNFFSALGDVAFAYAGHNVVLEIQATMPSSEDTPSKKPMWRGVILAYIGVAFCYLPVAFIGYYMFGNSVDDNILITLERPAWLIAAANLFVFVHVVGGYQVFAMPVFDMIETCMVTKLNFPPSTALRVTTRTIYVAVTMLIGICVPFFGSLLGFLGGFAFAPTSYFLPCIIWLKLKKPKKFGLSWTINWICIILGVVLMILSPIGALRNIILSAKNYKFFS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1539 439 Gene3D Amino acid/polyamine transporter I 25 433 - -
Gso13g1539 439 Pfam Transmembrane amino acid transporter protein 28 424 IPR013057 -
Gso13g1539 439 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 8 434 - -
Gso13g1539 439 PANTHER OS05G0424000 PROTEIN-RELATED 8 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1539 Gso-Chr13 30800254 30803567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1539 1 439 Organic Solute Cotransporters AT1G24400 72.109 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1539 - - gmx:100807881 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0082 18 693299 696807 Gso13g1539 13 30800254 30803567 GST
Gso13g1539 13 30800254 30803567 Gso8g0847 8 7868635 7870838 PCT
Gso8g0847 8 7868635 7870838 Gso13g1539 13 30800254 30803567 PCT