Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1512 ATGGATCCCGACGGCGTGGTCGCGGCGGAGGCGCTTATGGCGTCGGGTCGGAGTTCGGAGAAGCTGAGCCTTCCATCACTCCAATCCAAAATGAAGTGCGATCCCGAAGGCTACGAATCGGAGCTACTGCTTCTCTACAACCAATTCAATTCCTCGCTCGAACTCTTTCAGAAACAAGCCGCCATGAACTTCACCTCCATCTCCGGCATCGGCAGCGACCCCACCGTCGCCAAGGACCTCGGCGACAGGGCCATGTTCCTCGCCCACGTCACTCCTTTCTACCCCAAACACCTCGCCGATTTCCCCAAAAAACTCGCCGATTTGCTCCGCTGCGCCGCCCGCACGCTGCCTTCCGGCCTTCGCTGCCACCTCGCTCACGCGCTCATTCTCTTATCCAATCGAAAGATTGTTGACATTGGAGAAACGCTGTCGTTGTTCATGGAGCTTCAAACCCTAGGTGACAGAGTGCTCAAGAAGTTGGCGTTTGATCATGTTGTTCATAGTATAAGGCGTATGAACCAAAAGCATAAGAACGAAGCTAAGAACAGAGCGCTTCAGAATGTCTTGTTTGACTTGCTTCAGAAAGAGGCTGAAGAGCCGGCCAAGAGGGCACTCGTGACTCTGTGTGAGCTTCACAGGAGAAAAGTGTGGTTTGATGAGAGAACAGCAAATGCAATCTGTACTGCTTCCTTCCATCCAACATCTAGGATTATGATAGCAACTTTATCATTTCTGCTTGATTATGAGAAGATTCAAGATGATGACGACAGTGATAATTCAGACAGTGATGATGAAAAGACGGAATCACCTCAAGTTGTCCTTAGCAGGGAGACAGTTTATAAGGCAAGCCACCAAGGTACAGCAGCAAGCAAAAAGAAAAAGAAAGCAAAACTACAACGTGCAATACGCAGCATGAAAAGGCATCAGCGTGTATCATCTGATAGGAGCAAAAACAGTTATTATTCACCACTTAACCATCTGAAAGATGCTCAGGGTTTTGCTGAGAAGCTGTTCTCACGTCTTAGGAGTTGTAATGAACGATTTGAGGTAAAGATGATGATCTTGAAATTAATTGCTCGAACAGTTGGACTTCACCAGTTAATATTGCTAGAGTTCTATTCTTTTCTTCAGAAATATATTCAGCCACATCAACGAGACATTACAAATTTGCTTGCAGCAGTGGTTCAGGCTTGCCATGATATGGTTCCTCCTGATGCAGTTGAACCCTTGTTCAAACAAATAGTAAATCAATTTGTACATGACCGTTCACGTCCAGAGGCTATTACTGTTGGAATAAATGCAGTCAGGGAGATATGCATGCGCATGCCATTGTTAATGAATGAAGACTTGCTACAAGACCTTGCGCTATATAAGAAGTCACGTGAGAAGGCAGTTTCAATAGCAGCTCGATCTCTGATTGGGTTATTCAGAGAGGTTTGCCCCTCACTGCTAGTTAAGAAGGACCGTGGGCGGCCTATTGACCCTAAGGCAAGACCAAAGGCCTATGGAGAGCAGAATGTTGCGACTGACGTTCCTGATGTTGAGTTATTGCAGATGGCTATTGACAATGATGATGAGCAGGAGAGTGATCATTCTGATGGTTCTGCATGCAGTGTCTCTGACAATGACCAGGAAAATGATTTGATGAGTATAAATGATGACGATGACAATGATGATGAGAACCAGTTATGCAGTGATGATCCTGAAAGTGATGATGAAGCCAAAGATAGTGATGTTATATCAGACGATGACGACGAGAGAAGTTCTGATGACGAAGCTGATGTTAGTGATGCTGATGAAGTTAAGGGGGATGACATTGAAGACAATGAACAAGCTGATGGAGAGGATAGTGATGTTTCAGAACATGAAGAAGATGGTGATCTGCATTCTTTAAGTGATGATGGACTTGTGACAAAAAGTACAATGAAAGACTCAGCAAAAAAGAGGAAGTTTACTGATTTTAATGGTCAACTGATAGCTGCTGATACAAGTCTCCGGGCTCTGAAGAAATTAGCTGGGAGACAAATGGGGGATGTCATACCAGAATCTAACGACGGAATTCTTTCTAACGAAGACTTCAAGAGGATCAAAGAACTGAAGGCAAAAAGTGAGGCAAAAAATGCGTTGGCTCAGCAAGGGCTAGCGAAGTCAGCTGCAACTAAGGTTCCAAGCTCTGGTCAACTAAATCTAAAGCGAGTGGATGGTACCATGCTTGAAGCTCACATAAGGAAAAAGTTGAACAAGGATGAAAGGTTGGCATTGGTTAGAGCAGGAAGGGAGGAAAGAGGAAAATACCAAGCTCGAACTGCTGTGAAACAGAATAAGACGGGTGGGTTAAGCAACAGACAAAAGGAACACAAGAAGAAAATGCCCTTGGCTGCAAAGAGAGATAAGGTATCAAGAACTCGGATAGAGAAAAAGAGGAAAAATCAGCGATCTGGCAAACAGTTCCGTGGAAAGAAAGCGTGGAAGCAATAA 2478 0.4487 MDPDGVVAAEALMASGRSSEKLSLPSLQSKMKCDPEGYESELLLLYNQFNSSLELFQKQAAMNFTSISGIGSDPTVAKDLGDRAMFLAHVTPFYPKHLADFPKKLADLLRCAARTLPSGLRCHLAHALILLSNRKIVDIGETLSLFMELQTLGDRVLKKLAFDHVVHSIRRMNQKHKNEAKNRALQNVLFDLLQKEAEEPAKRALVTLCELHRRKVWFDERTANAICTASFHPTSRIMIATLSFLLDYEKIQDDDDSDNSDSDDEKTESPQVVLSRETVYKASHQGTAASKKKKKAKLQRAIRSMKRHQRVSSDRSKNSYYSPLNHLKDAQGFAEKLFSRLRSCNERFEVKMMILKLIARTVGLHQLILLEFYSFLQKYIQPHQRDITNLLAAVVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGINAVREICMRMPLLMNEDLLQDLALYKKSREKAVSIAARSLIGLFREVCPSLLVKKDRGRPIDPKARPKAYGEQNVATDVPDVELLQMAIDNDDEQESDHSDGSACSVSDNDQENDLMSINDDDDNDDENQLCSDDPESDDEAKDSDVISDDDDERSSDDEADVSDADEVKGDDIEDNEQADGEDSDVSEHEEDGDLHSLSDDGLVTKSTMKDSAKKRKFTDFNGQLIAADTSLRALKKLAGRQMGDVIPESNDGILSNEDFKRIKELKAKSEAKNALAQQGLAKSAATKVPSSGQLNLKRVDGTMLEAHIRKKLNKDERLALVRAGREERGKYQARTAVKQNKTGGLSNRQKEHKKKMPLAAKRDKVSRTRIEKKRKNQRSGKQFRGKKAWKQ* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1512 825 MobiDBLite consensus disorder prediction 801 825 - -
Gso13g1512 825 MobiDBLite consensus disorder prediction 524 647 - -
Gso13g1512 825 MobiDBLite consensus disorder prediction 547 622 - -
Gso13g1512 825 MobiDBLite consensus disorder prediction 779 800 - -
Gso13g1512 825 MobiDBLite consensus disorder prediction 758 825 - -
Gso13g1512 825 MobiDBLite consensus disorder prediction 488 511 - -
Gso13g1512 825 PANTHER PROTEIN SDA1 HOMOLOG 13 824 - -
Gso13g1512 825 Pfam NUC130/3NT domain 86 137 IPR012977 -
Gso13g1512 825 SUPERFAMILY ARM repeat 84 501 IPR016024 -
Gso13g1512 825 Pfam SDA1 446 821 IPR007949 -
Gso13g1512 825 Coils Coil 288 308 - -
Gso13g1512 825 MobiDBLite consensus disorder prediction 253 272 - -
Gso13g1512 825 PANTHER HSDA/SDA1-RELATED 13 824 IPR027312 GO:0000055|GO:0042273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1512 K14856 - gmx:100816774 1518.06