Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1508 ATGCAACATGATATTCTTATAAAGAAGCTCCTCCTTACACACGATCCAGATGGTCGCAGACTGGATTCTGAGACAATGCTTCTTGCTGTTGGCAACATTATGTTTCATACTTCCACAATAATAGGGGCTTTTAATCTATATTCTGCTTCCTTTCAGAAGAATGACATAACTGAAATTGAAACGATTGGTTGTAGTGAACCAGTAGGATTCATCATCACAAAAATAGGCAAGGTACTCTGCAGATGCTCTGGTGAAGGTGATATCAACTCAAGGATCATAAATTTGTTTGATTTGATAGGAAAGTATAGTTGGGATGCAAAAGTAGTATTAGTGCTTGCTGCTTTTGCAGTAAGATATGGTGAATTCTGGCAACTTAAGCAGCTATATCGTGGTAATGCTTTGGCAGCTTTAATTTCAAATATTAAGCAGCTGCCCAACAACTTAAAGCCACTGAAGCTACAAATCAAGGCATTGAGCTTGTTGGTTAAGACCATGATGGATGTGGCTAAGTGTATCATTAAGTTTGAGTACCTTCCCCTTCAACATGTAGAGCCTGGAAATGATATATTCCTTGTCAGAGACACAAAGTCTCGAATATACGAAGCTGCATACTGGATCACCAGAAGCTGTTTAGCATGTTTTTCTCAAGTCATGGATTTCACAGCCAAAAAACATGACCAAGTGTATTCAGATTCAGCAATAATTGCTGCTTGGGAGCTTTCAAGTTTGGCGTATAGATTAAGTGGCATATGCTGTAATCTCAGAAGACAGGTGGATCTGTGTCACAAAGAGCTAGAGAGAAACTTGTATGACAGGCTGTTGGATCTTGCTCGTGAGGAGAACATTGATAATCAAAAGACTCTCACTTTATTTTTTCCTTCCAAGAATTACTTGCCATTGAAGGATTGCTCAACAGAAGTAAAGCTTCGTGGTTCTGAACTGAAAAATAAGACAGTTCTGTTGTTGATCTCAAAACCGCAGCTACTCAACCCGATAGATATATACTTACTGGTCCAGCAAACATGTGATCATCCTCTGAATGAGAGGTTGAGGGAGAGTTATAAGATTGTGTGGATTCCCCTTCCATCTTCTGATACATGGACTGAAGCTGAAGAAAGAAGTTTTAATTTTATGTCCGATTCCTTGCCTTGGAATGCTGTTCGGAAACCAAGGTTACTTAGCTCAGCAGTGGTGAAGTACATAAGGGAACAATGGAACTACAAGGATGAGCCAATCATGGTAGCTCTAGATTCAAAAGGGAAGGTCACAAATTACAATGCTCTTGATATGATCAACATTTGGGGTGCACAAGCATACCCCTTTTCGGCTTCAAAAGAGGAAGAACTATGGCAAGACCAGAATTTGACAATGCAACTTTTGCTGGATGGCATCAATCCTCTCCTTGCTTACTGGGTTGAACAAGGCAAAAATATTTGCCTTTATGGGAGTGAAAACTTGGTTTGGATCCAACAATTCAATGATAAGATAACTGAGATCAAACGAGCAGGTCTGCAGCTGGAAACAATATATGTTGGTAATAGTCAATCAGGTGAAAATGTTAAGCAAATAATGGCAAGAGGTGGTGAAAAAAGTCTCAGTGATCCACTTTCCTTCACAAATGTGCAACACTTTTGGGTTCGATTGGAGACCATGAGAAGGTCTAAACTCAGACTAGGAAAGACACCAAGTTCTGATCATGTACTAGCTGAGTTGTCAACTTTGCTTGACATGGATGATAGAGAAGAAGGTTGGGCTGTGATTGGATGTGGGGGTTCAAGCTCAACTGATATTCTTAGGCTTCAAGGGATGCAGGTGATGGAATTCTTAAGGAAATGTTCAGAGTGGAGAGAAAATATAACCAATTTGGGATTGCATGGTGCTCTAAGAAACTTCCTAGACCCCCATTTTGTTGAAGGGAGTTGCAATCACTCATACTTTGTTTCCTCTAGAGAAAATGAAAGACCAAGTCAAGGAACTGTAATGTGTCAAGTGTGCAAGCGTCCCATGAAGAATTTTGTGGTGTACCAGCCATGA 2034 0.4012 MQHDILIKKLLLTHDPDGRRLDSETMLLAVGNIMFHTSTIIGAFNLYSASFQKNDITEIETIGCSEPVGFIITKIGKVLCRCSGEGDINSRIINLFDLIGKYSWDAKVVLVLAAFAVRYGEFWQLKQLYRGNALAALISNIKQLPNNLKPLKLQIKALSLLVKTMMDVAKCIIKFEYLPLQHVEPGNDIFLVRDTKSRIYEAAYWITRSCLACFSQVMDFTAKKHDQVYSDSAIIAAWELSSLAYRLSGICCNLRRQVDLCHKELERNLYDRLLDLAREENIDNQKTLTLFFPSKNYLPLKDCSTEVKLRGSELKNKTVLLLISKPQLLNPIDIYLLVQQTCDHPLNERLRESYKIVWIPLPSSDTWTEAEERSFNFMSDSLPWNAVRKPRLLSSAVVKYIREQWNYKDEPIMVALDSKGKVTNYNALDMINIWGAQAYPFSASKEEELWQDQNLTMQLLLDGINPLLAYWVEQGKNICLYGSENLVWIQQFNDKITEIKRAGLQLETIYVGNSQSGENVKQIMARGGEKSLSDPLSFTNVQHFWVRLETMRRSKLRLGKTPSSDHVLAELSTLLDMDDREEGWAVIGCGGSSSTDILRLQGMQVMEFLRKCSEWRENITNLGLHGALRNFLDPHFVEGSCNHSYFVSSRENERPSQGTVMCQVCKRPMKNFVVYQP* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1508 677 Pfam Sieve element occlusion C-terminus 444 676 IPR027944 -
Gso13g1508 677 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION C 2 676 - -
Gso13g1508 677 Pfam Sieve element occlusion N-terminus 3 278 IPR027942 -
Gso13g1508 677 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 2 676 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1508 Gso-Chr13 30554361 30558291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1508 - - gmx:100819823 1340.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1098 8 10109113 10113344 Gso13g1508 13 30554361 30558291 PCT