Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1470 ATGGATCATTCACATAAACTTCCTTCCTTTAGTTGTGAACTTAGAATTATACAAGCCCAAAACGTTGAGTCCATAAAGACCACAAAAAACCTATTTACCAGGTTATATCTTCCAGCAGGAAACAACAAAAGAATTCAACTCAACACCAAAAAAGTTTCCTCCAATACCCAATGTGTTCCCTTTTGGAACGAGTCCTTCAACTTAGATTGTTCATGTCCCCAAGAATTCTTGGAAAGCCTTAAGAAGGAAAGCCTTGTGTTGGAGCTAAGGCAAAACAAGATTTTTAGGTCACATTTGGTGGGAAAGGGTGAGATTCCTTGGAAGGCAATTCTTGAATCACCAAAGATGGAATTCAAGGAATGGGTGAAGATGGATTTGGTGAGTGGAATTAGTGATTGTGAAGATATTATGTTCAAGGCACCACAAGTGCAAGTGGAGATTAAAATACAAGTGGAGAAGGAGAATAATAATAATAATAGGAGAAAGAGGTTGAACAATAAGTGGGACGAGTGTGGATGCAAACATGGTCATGGTCAACATGCATGGTGCAGTGCTGATGATTATGATATATATGCTTTGGGGGCAGTTTTGGAGGCTTTTTGA 603 0.3881 MDHSHKLPSFSCELRIIQAQNVESIKTTKNLFTRLYLPAGNNKRIQLNTKKVSSNTQCVPFWNESFNLDCSCPQEFLESLKKESLVLELRQNKIFRSHLVGKGEIPWKAILESPKMEFKEWVKMDLVSGISDCEDIMFKAPQVQVEIKIQVEKENNNNNRRKRLNNKWDECGCKHGHGQHAWCSADDYDIYALGAVLEAF* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1470 200 Pfam C2 domain 13 117 IPR000008 -
Gso13g1470 200 SMART C2_3c 11 119 IPR000008 -
Gso13g1470 200 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 130 IPR035892 -
Gso13g1470 200 Gene3D C2 domain 1 134 IPR035892 -
Gso13g1470 200 PANTHER OSJNBA0006M15.15 PROTEIN 1 200 - -
Gso13g1470 200 CDD C2 13 123 - -
Gso13g1470 200 ProSiteProfiles C2 domain profile. 1 122 IPR000008 -
Gso13g1470 200 PANTHER OSJNBA0006M15.15 PROTEIN 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1470 Gso-Chr13 30204473 30205462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1470 - - gmx:100791093 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0154 18 1291707 1292774 Gso13g1470 13 30204473 30205462 GST