Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso13g1465 | ATGGCAAGGCAAGCGCTTCTCCTCTTTGTGTTCTGGCTATGCTTCTTGGCAAGAGTTAGATCGGACGAGGATTGCGTGTACACGGTGTACGTTCGGACGGGTTCGATCATCAAGGGAGGAACCGATTCAGTAATTGGTCTGAAGCTATACGACAAGTCCGGCTACGGCATATACATCACCAACCTCGAGGCATGGGGCGGGTTAATGGATCCGGGTCACAACTACTACGAGCGGGGCAACCTCGACATATTCAGTGGTAGAGGCCCTTGCTTGGAAGCACCCGTTTGCGAGGCCAACCTAACTTCTGACGGGTCGGGGCCCCATCACGGCTGGTACGTTAATTACGTCGAGGTCACCACCACTGGGGTCCACGCGCCTTGTTCTCAGCAGCAGTTCACCTTTGAGCAGTGGCTCGCCACCGATACGTCGCCGTATCAGCTCTGGGCTGTCAGGAACAACTGTCCAAACAACTTGGGCCCGGCCCAGCTCACCGATGTTGCCATCCCTCGGGCTGGGCCTGCTTTCTCTATTCTGGAATCCACCGTCCGCGTCTAG | 555 | 0.564 | MARQALLLFVFWLCFLARVRSDEDCVYTVYVRTGSIIKGGTDSVIGLKLYDKSGYGIYITNLEAWGGLMDPGHNYYERGNLDIFSGRGPCLEAPVCEANLTSDGSGPHHGWYVNYVEVTTTGVHAPCSQQQFTFEQWLATDTSPYQLWAVRNNCPNNLGPAQLTDVAIPRAGPAFSILESTVRV* | 185 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso13g1465 | 184 | Gene3D | PLAT/LH2 domain | 16 | 144 | - | - | |
| Gso13g1465 | 184 | CDD | PLAT_plant_stress | 25 | 153 | - | - | |
| Gso13g1465 | 184 | PANTHER | - | 1 | 184 | - | - | |
| Gso13g1465 | 184 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 22 | 146 | IPR036392 | GO:0005515 | |
| Gso13g1465 | 184 | ProSiteProfiles | PLAT domain profile. | 25 | 152 | IPR001024 | GO:0005515 | |
| Gso13g1465 | 184 | Pfam | PLAT/LH2 domain | 27 | 145 | IPR001024 | GO:0005515 | |
| Gso13g1465 | 184 | PANTHER | PLAT-PLANT-STRESS PROTEIN | 1 | 184 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso13g1465 | Gso-Chr13 | 30148931 | 30149936 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso13g1465 | - | - | gmx:100793024 | 391.734 |