Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1455 ATGGCCAGTGTACTACTTACCGCCACCATCTCCACGATCACCTTCGGAGACCAATATTCCATTTCTCGTTGTGCTTTTCCATCCCTATCCACTCTTCATCTCAGAGCCACACAGAAAGGAATTCACGTTGAGATGAACAAAAGGGTAGTGGTGGTAAAGGCAATGACGACTAAGAGTGATTTTGATGACACAGACGTTGATATTTCTTTGAGCCACAGAGTTAATGCTGTGAAGCCTTCCAAAACTGTAGCCATAAGTGATCATGCCACTGCTCTTTTACAATCTGGAGTTCCCGTTATTCGCTTAGCTGCTGGAGAACCTGATTTTGACACACCCGCTGTTATAGCTGAGGCTGGAATGAATGCAATTCGTGAAGGTTACACAAGATATACCCCTAATGCTGGAACATTAGAATTGCGCCAAGCAATATGTCACAAGCTAAAAGAGGAGAATGAAATTACATACACTCCTGATGAGATTGTGGTCAGTAATGGAGCTAAGCAGAGTGTTGTTCAAGCAGTGCTTGCAGTTTGTTCCCCAGGAGATGAGGTTATTATTCCAGCTCCATTCTATACGAGTTATCCGGAAATGGCAAGATTGGCTGATGCAACACCTGTGATTCTTCCAAGCCATATATCTAATAATTTTCTTTTAGATCCCAAACTGCTCGAAGCCAATCTTACCGAAAGATCAAGACTACTTATTCTTTGTTCACCGTGTAACCCAACAGGATCTGTCTACTCTAAGAAATTACTTGAAGAGATAGCCCAAATTGTTGCAAAGCACCCCAGGCTTCTGGTTCTCTCTGATGAAATATATGAACACATAATTTACGCACCAGCAACTCATACAAGCTTTGCATCTTTACCTGGAATGTGGGACCGAACTCTAACTGTGAATGGATTTTCCAAGACATTTGCAATGACTGGTTGGCGGCTTGGGTACATTGCTGGTACAAAACATTTTGTTGCAGCATGCGGAAAGATTCAAAGTCAGTTCACTTCAGGTGCAAGTAGTATATCTCAGAAAGCTGGAGTTGCTGCATTAGGACTAGGCTATGCTGGTGGGGAAGCTGTTTCAACCATGGTGAAAGCCTTCAGGGAAAGAAGGGATTTCTTGGTTGAAAGCTTTAGAGAAATGGATGGTGTGAAAATATCTGAACCACAGGGAGCATTTTATCTATTCATTGATTTCAGCTCCTATTATGGAAGAGAAGTTGAAGGGTTCGGTATAATTGAGAATTCTGACTCCCTCTGTCGATACCTGCTGGACAAGGGCCTGGTTGCCTTGGTGCCGGGGAGTGCATTTGGAGATGATTCTTGCATCCGCATCTCTTATGCCGAATCCCTTACCAATTTAAAGACAGCCGTGGAGAGGATTAAGAAAGCACTTATCCCTCTAATTAGCTCTGCTGCACTTGTTTAA 1425 0.4309 MASVLLTATISTITFGDQYSISRCAFPSLSTLHLRATQKGIHVEMNKRVVVVKAMTTKSDFDDTDVDISLSHRVNAVKPSKTVAISDHATALLQSGVPVIRLAAGEPDFDTPAVIAEAGMNAIREGYTRYTPNAGTLELRQAICHKLKEENEITYTPDEIVVSNGAKQSVVQAVLAVCSPGDEVIIPAPFYTSYPEMARLADATPVILPSHISNNFLLDPKLLEANLTERSRLLILCSPCNPTGSVYSKKLLEEIAQIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKTFAMTGWRLGYIAGTKHFVAACGKIQSQFTSGASSISQKAGVAALGLGYAGGEAVSTMVKAFRERRDFLVESFREMDGVKISEPQGAFYLFIDFSSYYGREVEGFGIIENSDSLCRYLLDKGLVALVPGSAFGDDSCIRISYAESLTNLKTAVERIKKALIPLISSAALV* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1455 474 CDD AAT_like 100 462 - -
Gso13g1455 474 Pfam Aminotransferase class I and II 98 460 IPR004839 GO:0009058|GO:0030170
Gso13g1455 474 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 301 314 IPR004838 GO:0003824|GO:0009058|GO:0030170
Gso13g1455 474 Gene3D Aspartate Aminotransferase, domain 1 83 458 IPR015422 GO:0003824
Gso13g1455 474 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 37 465 - -
Gso13g1455 474 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 37 465 - -
Gso13g1455 474 SUPERFAMILY PLP-dependent transferases 70 464 IPR015424 -
Gso13g1455 474 Gene3D - 129 351 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1455 Gso-Chr13 30034669 30039184 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1455 K15849 - gmx:100780254 918.302