Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1434 ATGGCCGAAACTCGAGACGCCGCCGCCGATGGGGTGCCCGGAACTCCCGCCATAAGGGAAATGAGACCCGAGACCGCGACCCATGCGGGAATCGGGTCGGGTGGGATTCGGAGGGTGAATTTCCGAGCGGAGATTGATACGTCACCGCCGTTTGGGTCGGTGAAAGAGGCCGTGACCCGTTTTGGAGGTAGCGGGCCTTGGATACCGTTTTTTAACAACATTGAAGATTTTGACCTAAAGAAAGTGGAGGAACAAGCAGCAGAGTTGGAGAAGGATTTGATTGTCAAGGAACTTGAAACGCTTGACGTGCTCGAAGAACTGGGAGCTACCAAGAGGATTGTGGAGGACTTGAAGCAGCAATTACAGAAGGAGGCTATGAAATGTTTAGCAACTCAAGATGTAAATTCATATGAACAAGTTGGAACTACTGTTATTAAGGAGATGGATAAGGAAAATTGTGGAAGTAATGTCAATGATCAAGAACAGGTGATGCAAATTCCAAGCCCATGCTCTATGTCATCATCACCTGATATGATCTTAATAGAGTTGAAACAAGCCAAATTGAATCTAGGCAAAACTATAAATGAACTTGGGGTGATACAGTCCTCTGTTGAATCTTTGAATAAGAAGATGAAGAAGGAGAAACTTTTTCTGGAGAGGACACGCGAAAAGCTAGCAACAAAGTTTGCAGCAGTATCTGCTCAAGAGAGGGTCCAAGAGCAAACAAGATTAAATCCACCAGCACCTCATGTAGAGTTCAATTTTGGTAACACTGCAAATAATTTCAATTCTGATTCTAGGCAGTGCAATAGAATGGCCGAGACAAGAAGACCTGAACCTTCAAAGCCCTTGAATGTGTATGAAGAATATGGATTTAGTGTTAAGACTGCTGAGATGAGGTGGCTTGCGGCTAAAAAGATGGAAGAAGCTGCAAGGGCTGCAGAAGCTATTGCTCTTGCTGAAATCAAGGCTCTATCTAATAATGCTGAGAGATCTTCAGGATTAGTTCTGCCAGAACCGGAGAAAGTCACTTTTGCTTTTGGAGAGTGCTCTCCCCTAAACCTCAAGGCTCAGATACCCGAGGAATCAACCTTGAAGAAGGTAATAGATTCCAACTTTCAAGTTGATGAAACAAAAATTTCCAAACTGACTATTCTGAAGAAGTTGGAGGAAGCAGCTGAAGAAGTTCTACACAGCAAACAAGTCTTGACAGATGCTTTAAACAGAGTTGAAACCGCAAACAGAAAGCAGCATGCTGCTAAGGAGGCTCTAAGGAGATGGATTCCTGAGGATGATATGAAGGAGTATAATAACACTATTAACTGCAACAAGTTTCATCAAGCTGGAATTTATCAAGATTCTCTGCAGGATGTAACCAGGTCAACAACATCAAACAATGATCCAAAGCCTGCTTTAAGGACCACAATTTCAATGAGAGATGTACTTAGCAGAAAGCAGGTTCCTGAAGGATATGCTACAAGAAAGGAGATGGAAGAGCACACTGAACGACAAAAGGTAGCATTGAGTCAAATGCTTCAGGCATTGAGGGAAGATCTAACTCTTCCACCGAAGACCGAGAAAGATGGGAGCAATCAGAAGCCGTTCGTAGCACAGAGGAAGAAATTTGGATTCATTCAAATATCACTCCCCTTGGCAAAGCCAAATAAGAAAAGGGGATGA 1680 0.4345 MAETRDAAADGVPGTPAIREMRPETATHAGIGSGGIRRVNFRAEIDTSPPFGSVKEAVTRFGGSGPWIPFFNNIEDFDLKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEAMKCLATQDVNSYEQVGTTVIKEMDKENCGSNVNDQEQVMQIPSPCSMSSSPDMILIELKQAKLNLGKTINELGVIQSSVESLNKKMKKEKLFLERTREKLATKFAAVSAQERVQEQTRLNPPAPHVEFNFGNTANNFNSDSRQCNRMAETRRPEPSKPLNVYEEYGFSVKTAEMRWLAAKKMEEAARAAEAIALAEIKALSNNAERSSGLVLPEPEKVTFAFGECSPLNLKAQIPEESTLKKVIDSNFQVDETKISKLTILKKLEEAAEEVLHSKQVLTDALNRVETANRKQHAAKEALRRWIPEDDMKEYNNTINCNKFHQAGIYQDSLQDVTRSTTSNNDPKPALRTTISMRDVLSRKQVPEGYATRKEMEEHTERQKVALSQMLQALREDLTLPPKTEKDGSNQKPFVAQRKKFGFIQISLPLAKPNKKRG* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1434 559 Pfam Weak chloroplast movement under blue light 43 133 IPR008545 -
Gso13g1434 559 Pfam Weak chloroplast movement under blue light 181 431 IPR008545 -
Gso13g1434 559 PANTHER WEB FAMILY PLANT PROTEIN 3 558 - -
Gso13g1434 559 MobiDBLite consensus disorder prediction 1 20 - -
Gso13g1434 559 Coils Coil 72 99 - -
Gso13g1434 559 Coils Coil 204 228 - -
Gso13g1434 559 Coils Coil 104 124 - -
Gso13g1434 559 Coils Coil 498 518 - -
Gso13g1434 559 MobiDBLite consensus disorder prediction 238 259 - -
Gso13g1434 559 Coils Coil 386 406 - -
Gso13g1434 559 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1434 Gso-Chr13 29815855 29819106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1434 - - gmx:100818214 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0184 18 1612737 1615967 Gso13g1434 13 29815855 29819106 GST
Gso13g1434 13 29815855 29819106 Gso14g0453 14 4334093 4336692 PCT
Gso14g0453 14 4334093 4336692 Gso13g1434 13 29815855 29819106 PCT