Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1433 ATGGACTTCACCACTTTCGCAAATTCCATATCCTATTCTCATGCAATTCCTCCAATACACCCTTATCGCCTTCAACCCTCTCCTTTTCCCCTTCACCTCCCATTTTCGAATTTAAAGCGTTCGGGTTTGGTTAAGAATCGGCTAATTGCTCGTTGCACTTCTAAGTCCGATGAATTTGGTTCTGTTAATGGGTTGCAATTCACGCCCAATAAGCTTTTTGTGGAGGAGGCTATTGGGGCTGAATATGGGGAAGGCTTTGAGACTTTTAGGGCAGATGGACCACTAAAAGTTGATGTGGACTATTTGAATGAGAAATTGCAAGATGGTTTTCTTCAGCGCATACGCTATGCTATGAAACCAGATGAAGCTTATGGACTGATCTTCTCTTGGGACAATGTGGTGGCTGGTACACGAGCTCTAAAAAGGAAGGCATGGGAGCAGCTGGCCTTTGAAGAGGGAAAGGATATTCCAGAAGAAGGTGATATGCACAAATTACTGTTTTATGCAGGTGCTGATTATGTGTTGCATAAGTTTTTTCTCTCAGATAAGGCGGAAAATGAGCTGAATAGGCTAAAGTTAAGGTTTTCTCAGATATATTATGATAATCTTGTCAGACTTGAAAAACCAATGGATGGCCTCAATGACTGGTTGGAAGCAGTTTATACAGCTCGCATCCCCTGTGCTGTGGTTTCAAGTCTTGATAGAAGAAATATGTTAGAGGCTTTGGAGCGAATGGGGCTCAGCAAGTATTTCCAGGCAATTGTGACAGAAGAGGATGGAATGGAGTCAATAGCTCATAGATTTCTTTCTGCTGCTGTCAAGTTGGATCGGAAACCTTCCAAGTGTGTGGTTTTTGAAGATGATCCTAGAGGAGTAACTGCTGCGCACAATTGTACAATGATGGCCGTAGCATTAATTGGAGCTCATCCTGCGTATGATTTGGGGCAGGCTGATCTTACCGTTGCTAACTTTAGTGAACTTTCTGTGATCAACTTGCGAAGACTATTTGCTAACAAGGGTTCTTCATTTATGGACTTACAGAAGCAGATCATAGAGAAAACTCCTCCCAAAAGGAAACTTACGATAGACACCATTTTTTAA 1101 0.4223 MDFTTFANSISYSHAIPPIHPYRLQPSPFPLHLPFSNLKRSGLVKNRLIARCTSKSDEFGSVNGLQFTPNKLFVEEAIGAEYGEGFETFRADGPLKVDVDYLNEKLQDGFLQRIRYAMKPDEAYGLIFSWDNVVAGTRALKRKAWEQLAFEEGKDIPEEGDMHKLLFYAGADYVLHKFFLSDKAENELNRLKLRFSQIYYDNLVRLEKPMDGLNDWLEAVYTARIPCAVVSSLDRRNMLEALERMGLSKYFQAIVTEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGVTAAHNCTMMAVALIGAHPAYDLGQADLTVANFSELSVINLRRLFANKGSSFMDLQKQIIEKTPPKRKLTIDTIF* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1433 366 Gene3D - 126 322 IPR023214 -
Gso13g1433 366 SUPERFAMILY HAD-like 99 327 IPR036412 -
Gso13g1433 366 Gene3D Putative phosphatase; domain 2 136 209 IPR023198 -
Gso13g1433 366 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 1 366 - -
Gso13g1433 366 Pfam Haloacid dehalogenase-like hydrolase 126 304 IPR041492 -
Gso13g1433 366 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 366 - -
Gso13g1433 366 CDD HAD_BPGM-like 194 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1433 Gso-Chr13 29806858 29812610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1433 - - gmx:100817685 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0185 18 1619709 1625751 Gso13g1433 13 29806858 29812610 GST