Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1419 ATGGCAAATGTTGTGGAAGTGAAAGTCGGTTTGCACTGTGAAGATTGTATCAAGAAAATCCTCAAGGCCATCAAGAAAATTGAAGATATTGAAACGTATAACGTGGACACACAGCTGAACAAGGTCATTGTTACGGGAAACGTCACAACAGAACAAGTGATCAGAGTCCTTCAAAAGATTGGCAAGAATGCAACTGCCTGGGAAGATGCTGAAACCAATAAGTGA 225 0.4089 MANVVEVKVGLHCEDCIKKILKAIKKIEDIETYNVDTQLNKVIVTGNVTTEQVIRVLQKIGKNATAWEDAETNK* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1419 74 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Gso13g1419 74 Gene3D - 2 68 - -
Gso13g1419 74 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
Gso13g1419 74 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 74 IPR045181 GO:0046872
Gso13g1419 74 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 2 74 - -
Gso13g1419 74 SUPERFAMILY HMA, heavy metal-associated domain 3 68 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1419 Gso-Chr13 29697572 29698634 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1419 - - gmx:100812505 139.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0199 18 1719352 1720159 Gso13g1419 13 29697572 29698634 GST
Gso13g1419 13 29697572 29698634 Gso14g0463 14 4417824 4418831 PCT
Gso14g0463 14 4417824 4418831 Gso13g1419 13 29697572 29698634 PCT