Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1411 ATGCTTTTGCTTCAACATCAACAAACTCATATCTATATCTCCCCAGAGATATTTTTTTATTATAAATTCAAACTAATAATAATAATGCCTTCTTCTCTTCACTTTGATAGGTTCAATCCTATCACCCATGCCGCCACCACTGTCGCCATCGCCAACGGCGTAAACTGTCCGAAGCAGCCTCAAGCGCCGCCCTCTTCCACGGCGGCGCGTCGCCTCGTGGTTCCCTCTCTCTCTTCCGGCAGAGGAATCGCGGCCCCCGACACGGTGGCGCTCCACCACGCGCACGTGGTGGACCCCAACCAGTGCTGCTCCATCGTGACGCAGCACATCAACGCCCCCGTCTCCGCCGTTTGGGCGGTGGTGCGGCGCTTCGACAACCCGCAGGGATACAAGAACTTCGTGAGGAGCTGCCACGTCATCACCGGCGACGGCATTCGCGTCGGCGCCGTCCGCGAGGTGCGGGTGGTGTCGGGGCTCCCCGCCGAGACGAGCACGGAGCGGCTGGAGATCCTCGACGATGAGCGCCACGTCATCAGTTTCAGCATGGTCGGCGGCGACCACCGCCTCAGGAACTACCAGTCGGTGACGACGCTCCACGCCAACGGGAACGGGACACTTGTCATCGAATCATACGTCGTTGACGTACCGCAGGGTAACACTAAGGAGGAAACATGCGTGTTCGTCGACACAATCGTACGTTGTAACTTGCAGTCGCTGGCTCAGATCGCTGAGAACAGAACCAATAACTGTGAACACACTGCACAACACTGTTAA 774 0.5724 MLLLQHQQTHIYISPEIFFYYKFKLIIIMPSSLHFDRFNPITHAATTVAIANGVNCPKQPQAPPSSTAARRLVVPSLSSGRGIAAPDTVALHHAHVVDPNQCCSIVTQHINAPVSAVWAVVRRFDNPQGYKNFVRSCHVITGDGIRVGAVREVRVVSGLPAETSTERLEILDDERHVISFSMVGGDHRLRNYQSVTTLHANGNGTLVIESYVVDVPQGNTKEETCVFVDTIVRCNLQSLAQIAENRTNNCEHTAQHC* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1411 257 CDD PYR_PYL_RCAR_like 102 244 - -
Gso13g1411 257 PANTHER - 18 256 - -
Gso13g1411 257 SUPERFAMILY Bet v1-like 101 243 - -
Gso13g1411 257 Pfam Polyketide cyclase / dehydrase and lipid transport 106 244 IPR019587 -
Gso13g1411 257 Gene3D - 66 257 IPR023393 -
Gso13g1411 257 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 18 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1411 Gso-Chr13 29613265 29614432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1411 K14496 - gmx:100808416 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0210 18 1808705 1810047 Gso13g1411 13 29613265 29614432 GST
Gso13g1411 13 29613265 29614432 Gso14g0476 14 4513371 4514543 PCT
Gso14g0476 14 4513371 4514543 Gso13g1411 13 29613265 29614432 PCT