Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1410 ATGCAAAAAATGATGAAGCCACCTTCTTCTTCTTCCTTCCCCTCTCTTCTCAGAGTCAAGCCTCGTCTCTCTTCTTATCTCTTCACCCTCTTAGCTTTCATTCTCTTCGCCGCCATCCTATATGGCCATGACTTTGTCTTCATCTTCCGTCCACGCCTCCACTCCAACGATCACACCACACAAACACTCTTCTCCACACCCGTCGATGTGAGATCTTCAACAACAAAGAAAGAAAATACCGAAGAAAATAAGACGGTGGTGACAAAATCGAAAAGGGAGGAAGAAGAAGAGTGTGACGTGTTCAACGGAAGGTGGGTACGCGACGAGTTGACTCGGCCACTGTACAAGGAATCGGAGTGTCCGTACATACAGCCACAATTAACATGTGAAGAACACGGTCGGCCTGATAAGGAGTATCAGCGGTGGCGATGGCAGCCTCACGGTTGCGATCTTCCCACATTCAGTGCCAGATTAATGTTGGAAAAGCTTCGTGGGAAGAGGATGATGTTTATTGGAGACTCCCTCAATCGAAGTCAATATGCCTCTTTGATATGCCTTCTCCATCAACTTATTCCTGAACATGCCAAATCCGAGGAAACCTTGGATTCACTCACTGTCTTTACAGCTAAGGAATACAATGCCACAATTGAGTTCTATTGGGCACCTTTTCTTCTTGAATCAAACTCCGATAATGCTGTCATCCATAGGGTAACTGATAGGATTGTGAGAAAAGGTTCAATCAATACGCATGGTCGTCATTGGAAAGACGCTGATATTGTTGTATTTAACACTTACCTTTGGTGGATAACTGGCTCTAAGATGAAGATCTTGCTTGGATCTTTTAACGATGAAGTAAAGGAGATTATTGAGATGTCAACAGAGGACGCTTATCGTATGGCTATCAAAAGTATGCTTAGATGGGTGAGGCTGAACATGGACTCCAACAAGACAAGAGTCTTCTTTATCAGCATGTCACCATCTCATGCAAAAAGCATAGAGTGGGGAGGTGAAGCAGGAGGGAACTGCTACAATGAAACAACACCAATTGATGATCCCACATATTGGGGTTCTGATTCTAAGAAAAGCATAATGCAAGTAATTGGGGAAGTGTTTAGAAAATCCAAAATACCTATAACTTTTCTCAACATTACCCAACTATCCAACTATCGTAAAGATGCACACACATCAATTTACAAGAAGCAATGGAATCGGTTGACTCCAGAGCAATTAGCTAACCCTGCTAGCTATGCTGATTGTACGCATTGGTGTTTGCCTGGACTTCCAGATACTTGGAATGAGCTTTTGTTTGCCAAGTTATTTTATCCTTGA 1329 0.4304 MQKMMKPPSSSSFPSLLRVKPRLSSYLFTLLAFILFAAILYGHDFVFIFRPRLHSNDHTTQTLFSTPVDVRSSTTKKENTEENKTVVTKSKREEEEECDVFNGRWVRDELTRPLYKESECPYIQPQLTCEEHGRPDKEYQRWRWQPHGCDLPTFSARLMLEKLRGKRMMFIGDSLNRSQYASLICLLHQLIPEHAKSEETLDSLTVFTAKEYNATIEFYWAPFLLESNSDNAVIHRVTDRIVRKGSINTHGRHWKDADIVVFNTYLWWITGSKMKILLGSFNDEVKEIIEMSTEDAYRMAIKSMLRWVRLNMDSNKTRVFFISMSPSHAKSIEWGGEAGGNCYNETTPIDDPTYWGSDSKKSIMQVIGEVFRKSKIPITFLNITQLSNYRKDAHTSIYKKQWNRLTPEQLANPASYADCTHWCLPGLPDTWNELLFAKLFYP* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1410 442 Coils Coil 77 97 - -
Gso13g1410 442 Pfam PMR5 N terminal Domain 96 150 IPR025846 -
Gso13g1410 442 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 151 437 IPR026057 GO:0016740
Gso13g1410 442 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 13 442 - -
Gso13g1410 442 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 13 442 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1410 Gso-Chr13 29604657 29608382 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1410 - - gmx:100807879 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0211 18 1817999 1822676 Gso13g1410 13 29604657 29608382 GST