Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1403 ATGGCAATTTCAGTTGAAAGCCTATTGAAAGAGAGGAAGTATCCTTTCATCTTCACCTTCATGGTCTTGCTCATTTGCTTCACGATCCTCACATTCACCTCCACCTCCACCTCCACCTTAGACCCCATTGGCTTCTACCCCGATGTCAAACCGCAACCACTCGCTCATTTTTCTTCGCCGAGTCCTAAGCGCCAAAGATTGCCACTCAAGGGAGAACCTTTCTTGGTTGATGCAAACATTGATTGGAAGCCTTGTAAGGGTCCATTGGCGATGGATTATATACCATGTTTGGATAACTTTAAGGCCATTAAGGCTCTCAAGAAAAGGAGGCACATGGAGCACAGGGAAAGGCACTGTCCTCATTCTAGTCCTCACTGTTTGGTGCCTCTCCCCAAAGGATATAAAGTCCCCCTTCCTTGGCCTAAGAGCAGGGACATGATTTGGTATGATAATGTCCCTCATACAAAGCTTGTTGAATACAAGAAGGAGCAAAACTGGGTGGTTAAGTCTGGCGATTATCTTGTCTTTCCCGGAGGTGGTACTCAATTCAAAGAAGGAGTTAACCATTATATTAAATTCATAGAGAAGACACTACCAGCAATCCAATGGGGAAAGAATATCAGGGTTGTTCTTGATGCTGGTTGTGGAGTTGCTAGCTTTGGCGGCTATCTTCTGGACAAAAATGTTATTACCATGTCATTTGCACCAAAGGATGAGCACGAAGCTCAGATACAGTTTGCTTTGGAACGAGGAATTCCTGCAACTCTTTCTGTCATTGGAACCCAAAAGTTGGCATTTGCTGACAACGGATTTGATTTGATTCATTGTGCAAGATGCAGGGTGCATTGGGATGCAGATGGTGGCAAACCGTTGTTTGAGCTCAATAGGATTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCCACACCAGTTTATCGCGATGATGAAAGAGATCAGAAAGTATGGAATGCCATGGTGACCGTAACAAAAGCAATGTGCTGGACTGTTGTGGCTAAGACTCTTGATTCATCTGGAATTGGGCTTGTTATATACCAAAAGCCTACCTCAACTTCCTGTTATCAGGAACGCAAAGAGAGAACTCCTCCTTTATGTGAAACTAGCGATAGGAAAAGTATCTCATCATGGTATACCAAACTCAGTAGCTGCCTTATACCTCTTCCAGTTGATGCTGAGGGTAATCTGCAGAGCTGGCCAATGCCTTGGCCCGAGAGGCTTACCAGTATACCTCCGAGCTTATCCATTGAATCCGATGCCAGCGAGATGTTCTTGAAGGACAGCAAACACTGGTCAGAATTAGTTTCAGACGTTTATAGGGATGGTCTTTCTATGAACTGGTCAAGTGTTCGAAATATAATGGACATGAATGCAGGTTATGCAGGATTTGCTGCAGCACTCATTGATCTACCAGTCTGGGTGATGAATGTAGTACCCATTGACATGCCAGATACTCTTACTACTATATTTGACAGAGGGCTAATAGGAATGTACCATGATTGGTGCGAGTCCTTAAACACATATCCTCGGACTTATGATCTTGTTCATGCTAGCTTTCTCTTCAAACATCTTATGCAAAGATGTGACATTGTAGTTGTGGCTGTGGAGATAGATCGAATAATGAGACCAGATGGGTATCTCCTGGTTCAGGACTCTATGGAAATAATTAACAAGCTCGGTCCGGTCCTGCGTTCACTTCATTGGTCTGTAACGTTATATCAAAATCAGTTTCTTGTTGGTAGGAAGAGTTTTTGGCGTCCAAGGCCCTAG 1785 0.4398 MAISVESLLKERKYPFIFTFMVLLICFTILTFTSTSTSTLDPIGFYPDVKPQPLAHFSSPSPKRQRLPLKGEPFLVDANIDWKPCKGPLAMDYIPCLDNFKAIKALKKRRHMEHRERHCPHSSPHCLVPLPKGYKVPLPWPKSRDMIWYDNVPHTKLVEYKKEQNWVVKSGDYLVFPGGGTQFKEGVNHYIKFIEKTLPAIQWGKNIRVVLDAGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLAFADNGFDLIHCARCRVHWDADGGKPLFELNRILRPGGFFAWSATPVYRDDERDQKVWNAMVTVTKAMCWTVVAKTLDSSGIGLVIYQKPTSTSCYQERKERTPPLCETSDRKSISSWYTKLSSCLIPLPVDAEGNLQSWPMPWPERLTSIPPSLSIESDASEMFLKDSKHWSELVSDVYRDGLSMNWSSVRNIMDMNAGYAGFAAALIDLPVWVMNVVPIDMPDTLTTIFDRGLIGMYHDWCESLNTYPRTYDLVHASFLFKHLMQRCDIVVVAVEIDRIMRPDGYLLVQDSMEIINKLGPVLRSLHWSVTLYQNQFLVGRKSFWRPRP* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1403 594 Gene3D Vaccinia Virus protein VP39 183 378 IPR029063 -
Gso13g1403 594 PANTHER PMT16, PUTATIVE-RELATED 4 593 - -
Gso13g1403 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 325 IPR029063 -
Gso13g1403 594 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 92 581 IPR004159 GO:0008168
Gso13g1403 594 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 593 IPR004159 GO:0008168
Gso13g1403 594 CDD AdoMet_MTases 210 304 - -
Gso13g1403 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 442 570 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1403 Gso-Chr13 29546867 29552305 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1403 - - gmx:100808221 1205.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g1403 13 29546867 29552305 Gso14g0483 14 4588450 4592405 PCT
Gso14g0483 14 4588450 4592405 Gso13g1403 13 29546867 29552305 PCT