Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1389 ATGCTTTCAGGTTCAAGCACTGGGAGTTACTTACAACTTAGAGCTGCAAAATTTCACATGAGACCAATTTCTGGTTTAAGAGGAGAGAAGTTGCAATTTTCAAGTGTAAGGTTTGGTCTTAAGCATAAAATTTCCTGCAAACTTACTGATGTGGGAAATGATTTAAGCTCATCAAAGGAGCTTGGAAAGTGTCAACCTTTGGTTAAGATGTGTGGCATTACATCAGCTAAAGATGCTGCAATGGCAGCTGAAGCTGGTGCAAGTTTTATTGGAATGGTCATGTGGCCTAACTCAAAACGTTCTGTTTCGCTTTCTGTTGCACTGGAGATATCGAAAGTTGCAAGAGATTATGGAGCAGAGCCTGTGGGTGTATTTGTGGATGATGATTCTGAAACAATTCTAAGAGCTTCTGATGCAGCAAACCTTGAATTTGTTCAGCTTCATGGATATGGATCTCGGTTAGCTTTTCCGTCTTTAATTCAGGAAAATCGTGTAATATATGTTCTCCATGTAAATGAGGACGGAAACCTTTTAAACACAATTTCTGATGAAGAGTGTTCTCTAGTTGATTGGGTCCTTGTAGACAGTGCAAAGGGTGGCAGTGGTAAAGCATTCAATTGGGACCAGTTGAAACTGCCAAACATTAAAAGTAAGTATGGTTGGCTCTTAGCAGGAGGGATCCAGCCTGAGAATGTTTCTAAGGCTCTATCTACTCTCAAGCCTGAAGGGGTCGATGTCAGCAGTGGCATTTGTGCATCAGATGGTATCCGCAAGGATCAATCAAGAATAACTTCCTTCATGAATGCAGTGCATTCTGTTCAATATTGA 828 0.4082 MLSGSSTGSYLQLRAAKFHMRPISGLRGEKLQFSSVRFGLKHKISCKLTDVGNDLSSSKELGKCQPLVKMCGITSAKDAAMAAEAGASFIGMVMWPNSKRSVSLSVALEISKVARDYGAEPVGVFVDDDSETILRASDAANLEFVQLHGYGSRLAFPSLIQENRVIYVLHVNEDGNLLNTISDEECSLVDWVLVDSAKGGSGKAFNWDQLKLPNIKSKYGWLLAGGIQPENVSKALSTLKPEGVDVSSGICASDGIRKDQSRITSFMNAVHSVQY* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1389 275 Hamap N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 66 273 IPR001240 GO:0004640|GO:0006568
Gso13g1389 275 Pfam N-(5'phosphoribosyl)anthranilate (PRA) isomerase 68 268 IPR001240 GO:0004640|GO:0006568
Gso13g1389 275 CDD PRAI 68 270 IPR001240 GO:0004640|GO:0006568
Gso13g1389 275 Gene3D Aldolase class I 65 274 IPR013785 -
Gso13g1389 275 PANTHER N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE 19 275 IPR044643 GO:0000162|GO:0004640
Gso13g1389 275 SUPERFAMILY Ribulose-phoshate binding barrel 67 272 IPR011060 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1389 Gso-Chr13 29424967 29427750 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1389 K01817 - gmx:100806100 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0232 18 2000093 2002926 Gso13g1389 13 29424967 29427750 GST