Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1368 ATGGGTTTTTCCTCAAAAGAAGAGAAGTCCAAAAGAATATTGAGGGGCTTGAAGACTCTCTTCTTCTTGATCACTATGGTTATATCGCTTCTTCTTTTCTCCGCCCCGGTTCTCCTTGTTATTGCCGATGCACTTGTTCCTTCTGCTCTGCTCTCCTCTCTTTCTCAATCTTCTTTCTCCATGGAAACTCTCGCTTCCCATTTCCACAACTACGATTTTCGATACTCTCTCATTGATATTCCCCTTGTGTCAATAATACGATCCTTCATCATCTTCTGTGTTTATAGTTTGTGTGATGGACCAAGGCTTTCGCATGGACCTTATTTGGGGATCACGACCATGTGCTCTGTTTTGTCTCTGATGTTTGTGTCGTTCAAAGCAGTTTACATCTTCAGTGTTTCGGGTATTGATCGAAGTGGGTATGTTCGTGCCACCGAAATAGCTCTGTTCGTGTGTTCTTGTGCGTTGGCCGTGGGGCATGTTGTGGTGGCCTACAGAACAAGTTGCAGGGAAAGAAGAAAGCTTTTGGTCTACAAAATTGATATTGAAGCTATTTCAGCTTGCAAAAATGGGTATCCTAGGTATCTGAAGATTCCTCAAGAAGAAAGAATCAAATGA 618 0.4256 MGFSSKEEKSKRILRGLKTLFFLITMVISLLLFSAPVLLVIADALVPSALLSSLSQSSFSMETLASHFHNYDFRYSLIDIPLVSIIRSFIIFCVYSLCDGPRLSHGPYLGITTMCSVLSLMFVSFKAVYIFSVSGIDRSGYVRATEIALFVCSCALAVGHVVVAYRTSCRERRKLLVYKIDIEAISACKNGYPRYLKIPQEERIK* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1368 205 Pfam Cholesterol-capturing domain 60 131 IPR019498 -
Gso13g1368 205 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 203 - -
Gso13g1368 205 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1368 Gso-Chr13 29202499 29205709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1368 8 200 Miscellaneous Gene Families AT1G80280 44.118 7.38e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1368 - - gmx:100795655 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0250 18 2173942 2177035 Gso13g1368 13 29202499 29205709 GST
Gso13g1368 13 29202499 29205709 Gso14g0506 14 4855241 4859139 PCT
Gso13g1368 13 29202499 29205709 Gso2g2184 2 46516068 46519919 PCT
Gso14g0506 14 4855241 4859139 Gso13g1368 13 29202499 29205709 PCT
Gso2g2184 2 46516068 46519919 Gso13g1368 13 29202499 29205709 PCT