Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1334 ATGGAGGAGGAGAAACAGAGAGGCAAAGGGCACAGACTATTGCTGATGCCATCACCATTACAAGGCCACATAACACCATTTCTCCACCTCGGTGACATCCTCTTCTCAAAGGGCTTCTCCATCACCATTCTCCACACCATCTTCAACTCCCCAAACCCTTCTTCCTACCCTCACTTCACCTTCCACGCCATCCCCGACGGCTTATCAGAAACAGAAGCTTCAACACTCGACGCCGTGCTCCTCACCGACCTCATCAACATCAGATGCAAGCACCCTTTGAAGGAATGGTTGGCTTCTTCGGTGCTGTCTCATCAGGAACCTGTTTCTTGCTTCATTTCCGATGCTGCACTTCACTTCACTCAACCTGTTTGTGACGAGTTGAAGCTCCCGCGCCTTGTGCTCAGAACTGGTGGAGCCTCGTCTTTTCTTGTTTTTGCCTCTTTTCCACTTCTTAGAGAAAAGGGTTACCTCCCCGTACAAGAATCTAGATTGGATGAGCCTGTGGTGGATCTCCCACCACTCAAGGTGAAAGATCTTCCAAAGTTTCAGTCGCAGGATCCTGAGGCATTCTATAAACTAGTTTGTCGCTTTGTTGAGGAATGCAAGGCATCTTCAGGGGTTATTTGGAACACCTTTGAAGAGTTGGAATCATCTGCTTTGACAAAATTGCGCCAAGATTTTTCCATACCAATATACCCTATAGGCCCTTTTCACAAACACTTGCTTACAGGCTCTGCGTCTTCTACTAGCTTGTTGACCCCAGACAGAAGTTGTATGTCTTGGTTAGACCAACAAGATCGTAACAGTGTTGTTTATGTGAGTTTTGGGAGTATTGCAGCAATAAGTGAGGCTGAGTTCTTGGAGATTGCTTGGGGGTTAGCCAACAGCAAGCAGCCGTTCTTGTGGGTGATTCGACCTGGGCTAATCCATGGTTCAGAATGGTTTGAACCATTGCCAAGTGGGTTCCTAGAGAATTTGGGAGGAAGAGGCTACATTGTCAAATGGGCTCCTCAAGAACAAGTGCTTAGCCATCCTGCAGTGGGAGCATTTTGGACTCATAATGGTTGGAACTCAACTCTAGAGAGCATATGTGAAGGGGTTCCAATGATTTGTATGCCATGTTTTGCAGACCAAAAGGTCAATGCCAAATATGCAAGCAGTGTTTGGAGGGTTGGGGTGCAATTACAGAATAAGCTAGATAGAGGAGAGGTAGAGAAGACCATTAAAACACTCATGGTTGGGGATGAAGGGAACGAGATTAGAGAGAATGCCTTAAATTTGAAGGAAAAGGTAAATGTTTCCTTGAAACAAGGTGGTTCGTCTTACTGTTTCCTTGATAGATTGGTTAGTGACATATTGTCACTGAAATCTGCTACATCTAGAGTTCACTGA 1392 0.4576 MEEEKQRGKGHRLLLMPSPLQGHITPFLHLGDILFSKGFSITILHTIFNSPNPSSYPHFTFHAIPDGLSETEASTLDAVLLTDLINIRCKHPLKEWLASSVLSHQEPVSCFISDAALHFTQPVCDELKLPRLVLRTGGASSFLVFASFPLLREKGYLPVQESRLDEPVVDLPPLKVKDLPKFQSQDPEAFYKLVCRFVEECKASSGVIWNTFEELESSALTKLRQDFSIPIYPIGPFHKHLLTGSASSTSLLTPDRSCMSWLDQQDRNSVVYVSFGSIAAISEAEFLEIAWGLANSKQPFLWVIRPGLIHGSEWFEPLPSGFLENLGGRGYIVKWAPQEQVLSHPAVGAFWTHNGWNSTLESICEGVPMICMPCFADQKVNAKYASSVWRVGVQLQNKLDRGEVEKTIKTLMVGDEGNEIRENALNLKEKVNVSLKQGGSSYCFLDRLVSDILSLKSATSRVH* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1334 463 PANTHER CYTOKININ 7-BETA-GLUCOSYLTRANSFERASE-RELATED 7 456 - -
Gso13g1334 463 Gene3D Glycogen Phosphorylase B; 13 439 - -
Gso13g1334 463 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 12 457 - -
Gso13g1334 463 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 267 427 IPR002213 GO:0008194
Gso13g1334 463 CDD GT1_Gtf-like 12 429 IPR002213 GO:0008194
Gso13g1334 463 Gene3D Glycogen Phosphorylase B; 253 433 - -
Gso13g1334 463 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 7 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1334 Gso-Chr13 28836823 28839617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1334 9 457 Glycosyltransferase AT3G55700 51.965 5.55e-171 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1334 - - gmx:100783133 939.102