Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1333 ATGAGCCACGCCGGCCTCTGGCTTCCGCCGCAGTTCCTCGCCGGAGACCCTGACACAACCCTTTCGAACTCCGATTTCAGCTTCCCTTCCGAGTTCCCCTACGAGTTCGGATTGTCTTCTCCGGAGAGCAGCGACGACGGCGAAGAGGACTTCTTCGCCGGCCTCAGTCGCCGACTCGGTCAGACCTCGCTTCACGAAACTCGCAAGCAACTCTCATCCACTGTTTCGGAGATTCCAAGGAAAACTCAGGGTTTGGTCGGTTCCCCTCAGTCCACGCTCGCCGGAATAGGAAGCTGGTCCGGTCGGAGCGCCGTTTCCGGCGACGGAAGCCCCAACGGGTACTCGCGTGTCCCTTCGCCCTCGACGACGCCGTTTGACGAAAACAACGACCCCTGGGAAGTGATTTACGCAGCCGCAGTTCAAATCGCAAGGATGAAGATGAACAACAACAACCAAGTTCCAGCACAGTATGATTTTCACAATAATAGAAGGTTACTCACTCATCATTGCCCTAACCGGAGTTTCAATCAGGTCGTGAGAGCGAAGCAACAGTGTGGTTCGGATTGGGGAAGGCCAACCAAGCCTAATAACTATTTGGTTCAGCAGCAACAGGTTAAGGTTCAGAGTAGAGCGCGTGAGTTTGGGCACGAGAGTGTGAATGCGAAATGCACTCGTCCATCTGCGTGGCCCCCTTCGCAAGTTCAGCAGCAAAACAACCGGGTACAGTTTGGCGGATCCGGGTCTAGGGTTGGTGGATCTTCTGTGAAAAGGGGGTGTGGTGGAACTGGGGTGTTCTTGCCTCGCCATTATGAAACCCCTTCTGAGCCACGTCGCCAGAAAACTGGTTGTGCGTCTGTTTTGTTACCAGCAAAGGTGGTTCATGCTTTGAACTTGAATATTGATGACTTGAATGGGACTACCCAACCGCGTTTCTCGAATGCTTTTGCTACGGATTATGAAGCGATTTTAGCGAGGAGAAACGCGCTTCTCATGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGAGGTTAATAAGTGTTCGGCGAGAAGAGGCAGCCAACTATGAAATTCGCCTTCCTCAAGAGTGGACTTACTGA 1095 0.5342 MSHAGLWLPPQFLAGDPDTTLSNSDFSFPSEFPYEFGLSSPESSDDGEEDFFAGLSRRLGQTSLHETRKQLSSTVSEIPRKTQGLVGSPQSTLAGIGSWSGRSAVSGDGSPNGYSRVPSPSTTPFDENNDPWEVIYAAAVQIARMKMNNNNQVPAQYDFHNNRRLLTHHCPNRSFNQVVRAKQQCGSDWGRPTKPNNYLVQQQQVKVQSRAREFGHESVNAKCTRPSAWPPSQVQQQNNRVQFGGSGSRVGGSSVKRGCGGTGVFLPRHYETPSEPRRQKTGCASVLLPAKVVHALNLNIDDLNGTTQPRFSNAFATDYEAILARRNALLMQEQQQQQQQQRLISVRREEAANYEIRLPQEWTY* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1333 364 PANTHER TIP41-LIKE PROTEIN 20 364 - -
Gso13g1333 364 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 20 364 - -
Gso13g1333 364 MobiDBLite consensus disorder prediction 1 26 - -
Gso13g1333 364 MobiDBLite consensus disorder prediction 82 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1333 Gso-Chr13 28819834 28822006 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1333 - - gmx:100782060 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0283 18 2523059 2524992 Gso13g1333 13 28819834 28822006 GST
Gso13g1333 13 28819834 28822006 Gso14g0545 14 5187995 5190442 PCT
Gso13g1333 13 28819834 28822006 Gso2g2150 2 46162360 46164780 PCT
Gso14g0545 14 5187995 5190442 Gso13g1333 13 28819834 28822006 PCT
Gso2g2150 2 46162360 46164780 Gso13g1333 13 28819834 28822006 PCT