Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1315 ATGACCGGCGATTTTCTCCGGACACCCCTCACTTTGAAGATCGCCACTTTCTTCTTCATCGCCGTCACATTCTTCTACTTCGGCAAGCATTGGTCCGATGGCTACCAGCAACTCGTCTTCTTCACTCAGCGATCCGACTCGGATCCGAACTCCAACCCGGTCGTTTCCACGTCCCCGAATTACGCCAAACCATTCAACGTCTCCGCCCTAATTGAGAACAACTCCCAACCAGGGCCGCCGGAAAATGTTCCTCCGCCGCCGCCGGAGGAGGGGTCGATCGAGAAACTGGGGGTGGTGAACGAGAATGGCACGATGTCCGATGAGTTCGAGGTGGGGGATTTCGATCCGGGAATGGTGGAACAGTGGGTGAACGAGACTCAGGTTGATGAGAGCGAGGGTTCTTCTTCTTCTCCTTCTTCTACTTCTGATTCTGATGTGGGATTTGGGATCAAGAAGTTCGGGTTGTGCCCGCGCGAGATGAGCGAGTATATACCGTGTTTGGACAACGAGGACGCGATTCGGAAGCTTCCTTCGACGGAGAAAGGGGAGAGGTTCGAGCGGCATTGCCCTGAGCAAGGTCGAGGGTTGAATTGCTTGGTTCCTGCACCCAATGGGTACCGTACCCCTATTCCATGGCCTAGAAGCCGAGATGAGGTATGGTACAATAATGTTCCTCATACACGTCTTGTTGAAGATAAGGGAGGCCAAAACTGGATTTCTAGAGACAAGGATAAGTTTAAATTCCCGGGAGGTGGTACACAGTTTATACATGGGGCAAATGAATACTTGGACCATATTTCTAAGATGATTCCTGATATTACATTTGGCAAGCATATAAGGGTGGTTCTTGATGTTGGCTGTGGCGTTGCTAGTTTTGGTGCGTACTTACTGTCACGGAATGTTGTCACCATGTCTGTTGCTCCCAAGGATGTTCATGAAAATCAGATTCAGTTTGCTCTTGAGCGTGGCGTACCAGCAATGGCAGCAGCATTTGCTACTAGACGCTTGTTATATCCAAGTCAAGCTTTTGACTTGGTACATTGTTCACGCTGTAGAATTAATTGGACTAGAGATGATGGGATACTGCTGCTTGAAGTTAATAGGATGCTAAGAGCAGGAGGGTACTTTGTCTGGGCTGCCCAGCCGGTTTATAAGCATGAAGAAGTTTTAGAAGAACAATGGGAAGAGATGCTTAATCTTACCACTCGACTCTGCTGGAATTTTTTGAAAAAAGATGGGTACATTGCAGTATGGCAGAAACCTTCTGACAATAGTTGCTATCTAGACCGTGAGGAAGGAACTAAACCTCCAATGTGTGACCCAAGTGATGACCCAGACAATGTTTGGTATGCTGATCTAAAAGCATGCATCTCTGAATTGCCTAAGAACATGTATGGAGCAAATGTTACTGAATGGCCTGCACGTTTGCAAAGCCCCCCTGATAGGCTTCAAACCATAAAGCTTGATGCTTTCACATCCAGATCAGAGCTTTTTAGGGCAGAATCAAAATACTGGAATGAAATAATAGCAAGCAATGTTCGTGTTTTGCACTGGAAAAAAATCAGATTAAGAAATGTTATGGACATGCGAGCAGGTTTTGGAGGATTTGCAGCAGCATTGATTGATCAGAATCTTGACAGCTGGGTTATGAATGTGGTTCCTGTTAGTGGTCCAAACACCTTGCCTGTTATATATGACCGTGGGTTAATTGGAGTTATGCATGACTGGTGTGAGGCATTTGACACCTACCCAAGAACCTATGATTTATTGCATGCTGCAAACCTACTTTCTGTTGAGAAAAAAAGATGCAATGTCTCATCCATTATGCTTGAGATGGATCGGATACTAAGACCTGGCGGACGTGTGTACATCCGCGATTCTCTTGATATCATGGATGAACTTCAAGAGATTGCCAAGGCAATAGGCTGGCACGTGATGTTGCGAGACACAGAGGAGGGGCCTCATGCAAGTTATAGGGTATTGGTTTGTGATAAGCACTTGCTACTCTCTTAA 2013 0.4645 MTGDFLRTPLTLKIATFFFIAVTFFYFGKHWSDGYQQLVFFTQRSDSDPNSNPVVSTSPNYAKPFNVSALIENNSQPGPPENVPPPPPEEGSIEKLGVVNENGTMSDEFEVGDFDPGMVEQWVNETQVDESEGSSSSPSSTSDSDVGFGIKKFGLCPREMSEYIPCLDNEDAIRKLPSTEKGERFERHCPEQGRGLNCLVPAPNGYRTPIPWPRSRDEVWYNNVPHTRLVEDKGGQNWISRDKDKFKFPGGGTQFIHGANEYLDHISKMIPDITFGKHIRVVLDVGCGVASFGAYLLSRNVVTMSVAPKDVHENQIQFALERGVPAMAAAFATRRLLYPSQAFDLVHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEVLEEQWEEMLNLTTRLCWNFLKKDGYIAVWQKPSDNSCYLDREEGTKPPMCDPSDDPDNVWYADLKACISELPKNMYGANVTEWPARLQSPPDRLQTIKLDAFTSRSELFRAESKYWNEIIASNVRVLHWKKIRLRNVMDMRAGFGGFAAALIDQNLDSWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEAFDTYPRTYDLLHAANLLSVEKKRCNVSSIMLEMDRILRPGGRVYIRDSLDIMDELQEIAKAIGWHVMLRDTEEGPHASYRVLVCDKHLLLS* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1315 670 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 162 665 IPR004159 GO:0008168
Gso13g1315 670 Gene3D Vaccinia Virus protein VP39 259 424 IPR029063 -
Gso13g1315 670 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 186 405 IPR029063 -
Gso13g1315 670 PANTHER METHYLTRANSFERASE PMT12-RELATED 12 668 - -
Gso13g1315 670 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 516 645 IPR029063 -
Gso13g1315 670 MobiDBLite consensus disorder prediction 126 146 - -
Gso13g1315 670 MobiDBLite consensus disorder prediction 70 93 - -
Gso13g1315 670 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 12 668 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1315 Gso-Chr13 28565202 28571179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1315 - - gmx:100777765 1346.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0305 18 2776406 2782129 Gso13g1315 13 28565202 28571179 GST
Gso13g1315 13 28565202 28571179 Gso14g0567 14 5433938 5438970 PCT
Gso13g1315 13 28565202 28571179 Gso2g2130 2 45953566 45958351 PCT
Gso14g0567 14 5433938 5438970 Gso13g1315 13 28565202 28571179 PCT
Gso2g2130 2 45953566 45958351 Gso13g1315 13 28565202 28571179 PCT