Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1312 ATGGCAGATGCAGCGAAGGGTACCTACAGAGCCTCAAGATGGTCCCTTAACGGAATGACTGCTCTTGTGACCGGTGGAACTCGTGGAATTGGGCATGCCATAGTGGAGGACTTATGTGGGTTTGGTGCCACTGTCCACACTTGTTCCAGAAACCAAGCTGAATTGGATAAGTGTTTGACAGAATGGCGTAGCAAAGGTTTTTTGGTTTCTGGGTCTGTGTGTGATGTCTCATCTCAACCCCACAGAGAGAAGTTCATTCAGGAAGTCACTTCCATCTTCAATGGCAAGCTTAACATCTATGTGAACAATGTTGGAGTAAACTATAGGAAGCCCACAATTGAGTACACTGCTGAAGTATATTCACAAATTATGGCAGTCAATTTAGACTCTGCTTACCATCTGTGCCAACTTGCATATCCTCTTCTGAAAGCATCTGGAATGGGAAGCATTGTGTTCATTTCATCTATTGCTGGAGTGGTCAGCTTAGGTACTGGATCTGTCTATGCAGCATGTAAAGCTGCAACCAATCAGCTTACGAAATATCTTGCTTGTGAATGGGCTAAAGACAACATAAGGAGCAATTGTGTTGTTCCTGCCACTACCAATACACCACTTGTTGAACATCTGCTTCGCAACAAGAAGTATGTAGAAGAAATGTTATCTCGAACTCCTCTTGGGCGCATCGCAAAACCTGAAGAAGTTTCTGCCTTGGTGGCTTACCTTTGTCTGCCAGCTGCCTCTTACATCACAGGACAGGTTGTTCTTGTTGATGGAGGATTATCAGTTAATGGATTTCAAACCAGCATGAGAATAACATGA 819 0.4396 MADAAKGTYRASRWSLNGMTALVTGGTRGIGHAIVEDLCGFGATVHTCSRNQAELDKCLTEWRSKGFLVSGSVCDVSSQPHREKFIQEVTSIFNGKLNIYVNNVGVNYRKPTIEYTAEVYSQIMAVNLDSAYHLCQLAYPLLKASGMGSIVFISSIAGVVSLGTGSVYAACKAATNQLTKYLACEWAKDNIRSNCVVPATTNTPLVEHLLRNKKYVEEMLSRTPLGRIAKPEEVSALVAYLCLPAASYITGQVVLVDGGLSVNGFQTSMRIT* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1312 272 PANTHER TROPINONE REDUCTASE 8 269 IPR045000 GO:0016491
Gso13g1312 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 IPR002347 -
Gso13g1312 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Gso13g1312 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Gso13g1312 272 Pfam Enoyl-(Acyl carrier protein) reductase 27 261 - -
Gso13g1312 272 Gene3D - 9 264 - -
Gso13g1312 272 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 262 IPR036291 -
Gso13g1312 272 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 8 269 - -
Gso13g1312 272 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Gso13g1312 272 PRINTS Glucose/ribitol dehydrogenase family signature 95 106 IPR002347 -
Gso13g1312 272 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Gso13g1312 272 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Gso13g1312 272 PRINTS Glucose/ribitol dehydrogenase family signature 189 206 IPR002347 -
Gso13g1312 272 PRINTS Glucose/ribitol dehydrogenase family signature 224 244 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1312 Gso-Chr13 28533949 28539089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1312 13 265 Miscellaneous Gene Families AT2G29290 61.265 5.11e-114 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1312 K08081 - gmx:100775806 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0308 18 2819971 2822842 Gso13g1312 13 28533949 28539089 GST