Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1308 ATGGCTCTTGTTCTCAACGTCTCATTGTGTTCCACTTGTAAACCCCATCTTTCTCTCTCAACCTCCAATCCCAACAAAGCTTCTTCTACTTTTCCTTTTCCTCTTCCTCTTCTGGGACTCAACATAAAGAAAAGTCTCCAACCATCTCAGAAACTCACATTTTCATTGGGTGAATCCGTGTCTGGTGCCACCCTCGTTGCTCTCCTCTCTGCTTCTTTCATCTTTGTTGATCCCGCACTTGCATTCAAGGGTGGAGGGCCATACGGGCAAGAAGTGACAAGGGGACAAGATCTCACTGGGAAGGACTTCAGTGGCAAGACTCTGATCAAACAAGACTTCAAAACGTCCATACTGAGACAAGCCAATTTTAAAGGTGCAAAGTTAATAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGACCTTTCGGATGCTGATCTTAGAAATGCAGATTTTTCCCTGGCAAATGTGACAAAGGCAAATTTAAGCAATGCTAACTTGGAAGGTGCACTTGCAACAGGAAATACATCTTTTAAGGGATCAAATATTACAGGCGCTGACTTCACGGATGTACCACTAAGAGAAGATCAACGTGAATACCTCTGCAAAGTTGCTGATGGAGTGAACCCAACAACTGGAAATGCTACGCGTGATACATTGTTCTGCAATTAG 675 0.437 MALVLNVSLCSTCKPHLSLSTSNPNKASSTFPFPLPLLGLNIKKSLQPSQKLTFSLGESVSGATLVALLSASFIFVDPALAFKGGGPYGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLIGASFFDADLTGADLSDADLRNADFSLANVTKANLSNANLEGALATGNTSFKGSNITGADFTDVPLREDQREYLCKVADGVNPTTGNATRDTLFCN* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1308 224 SUPERFAMILY Pentapeptide repeat-like 90 194 - -
Gso13g1308 224 Pfam Pentapeptide repeats (8 copies) 136 171 IPR001646 -
Gso13g1308 224 Gene3D - 81 224 - -
Gso13g1308 224 PANTHER THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC 13 224 IPR044213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1308 Gso-Chr13 28504192 28510736 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1308 - - gmx:100500352 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0310 18 2829805 2832733 Gso13g1308 13 28504192 28510736 GST