Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1302 ATGGCGAACCCTGAAGGCAGTAGCAGAGGCTCTAGATGGTCCCTTAAGGGAACCACTGCTCTCGTTACTGGAGGAACGCGTGGAATTGGGCACGCTGTGGTGGAGGAACTAGCGGAGTTTGGTGCCACAGTGTACACTTGTTCGAGGAATGAAGAAGAGCTGAATGCATGCTTGAAGGAGTGGAAAGAGAAGGGATTTTCGGTTTCTGGGTTGGTTTGTGATGCGTCTTCTCCACCCCATAGAGAGAACCTCATTCAACAAGTGGCCTCTGCTTTCAACGGCAAGCTCAACATACTTGTAAACAATGTTGGAACAAATGTGAGGAAGCCGACAATTGAGTATACAGCCGAAGAATATTCAAAATTGATGGCAACTAACTTGGACTCCGCATACCATTTGTGCCAACTTGCATATCCTCTTCTTAAAGCATCTGGAAATGGAAGTATTGTGTCCATTTCCTCTGTTGCAAGTCAGACAAGCGTAGGTTCTGGAGCCATTTACGCAGCAACTAAAGCTGCTATTGATCAGCTTACCAAATATTTTGCTTGTGAATGGGCAAAAGACAATATAAGGAGCAACGGTGTTGCACCCTGGTATACCATAACTTCACTTGTGGAACCTTTGCTTGCGAACAAACAGCTTGTTAGTGAGATAATATCTCGAACGCCGATAAAGCGGATGGCAGAAACACATGAAGTTTCATCCTTGGTGACTTTCCTTTGCCTGCCAGCAGCATCCTACATCACTGGACAGATTGTTTCAGTTGATGGAGGATTCACTGCTAATGGATTTCAACCCAGCATGAGAATTTCTTAA 816 0.4522 MANPEGSSRGSRWSLKGTTALVTGGTRGIGHAVVEELAEFGATVYTCSRNEEELNACLKEWKEKGFSVSGLVCDASSPPHRENLIQQVASAFNGKLNILVNNVGTNVRKPTIEYTAEEYSKLMATNLDSAYHLCQLAYPLLKASGNGSIVSISSVASQTSVGSGAIYAATKAAIDQLTKYFACEWAKDNIRSNGVAPWYTITSLVEPLLANKQLVSEIISRTPIKRMAETHEVSSLVTFLCLPAASYITGQIVSVDGGFTANGFQPSMRIS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1302 271 Pfam Enoyl-(Acyl carrier protein) reductase 26 260 - -
Gso13g1302 271 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Gso13g1302 271 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Gso13g1302 271 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Gso13g1302 271 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Gso13g1302 271 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Gso13g1302 271 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
Gso13g1302 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Gso13g1302 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Gso13g1302 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
Gso13g1302 271 PANTHER TROPINONE REDUCTASE 4 267 IPR045000 GO:0016491
Gso13g1302 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 262 IPR036291 -
Gso13g1302 271 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 4 267 - -
Gso13g1302 271 Gene3D - 8 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1302 Gso-Chr13 28426454 28429681 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1302 12 266 Miscellaneous Gene Families AT2G29290 60.700 3.41e-113 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1302 K08081 - gmx:100819646 514.612