Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1300 ATGGCGGCTGCGACGGAATTTGGGGTGTCGCAATTCTTGCAGGGTACCTCCAGGCAAACTCTGTTTTTGAAGAAGAAGCCACAGAGACAGAGAAGAAGCATGTTTTGGGGTGCGCTCTGGAATAGGAATTGGGCTCTGGGATCAACTCACAGAGCTTTGCCTTTAAGGTGCCAGGCTCAGGAAAATCCCAGAGCTGTAGTTTCTGGTGGCGTGAGCAGTTCTGTAGAGGAGCAACCTGCCTTGGTTGAGAAGCCCGCTTCCGAAGTAGTTCATTTGTATCGTGTCCCGTTTATGCAAGCAAGTGCAGCTGCTGAGCTTTTGAAGGAAGCTCAAGTGAAAATCTCCGGTCAGATCGTGGAAATACAGACTGAGCAGTGTTATAATGTTGGCCTTAGTTCACAACTTTCTGGTGGAAAATTTTCGGTCCTTAGATGGCTTCTTCAAGAAACATTTGAGCCTGAGAATCTGGGAACTGAGAGCTTTCTTGAGAAGAAGAAGAAAGAGGGTCTGAGTCCAGTTATTGTTGAAGTTGGCCCCAGGCTGTCATTTACCACGGCATGGTCTACCAATGCTGTTGCAATTTGCCAAGCCTGTGGTTTGACAGAAGTGAACCGTTTGGAACGGTCCAGGAGGTACTTGTTGTTCACCACCACTGAACTGCAAGATTATCAAATCAATGATTTTACGTCTATGGTGCATGATAGGATGACTGAATGTGTTTATGTTCAGAAGCTAACATCCTTCGAGACTAGTGTTGTTCCAGAGGAGATTCGTTATATACCTGTCATGGAGAAGGGGCGAAAGGCATTAGAAGAGATTAATCTGGAGATGGGTTTTGCCTTTGATGACCAGGATTTGGAATACTACACCAAACTCTTCAGGGAAGACATTAAGCGTAACCCAACAAATGTGGAATTGTTTGATATTGCGCAGTCCAACAGTGAGCACAGCAGACACTGGTTTTTTACTGGAAATATTTTCATTGATGGACAGCCTGTGAATAGAACTCTCATGCAGATTGTGAAAAGTACTCTGCAGGCAAACCCAAATAACTCAGTTATTGGCTTCAAGGATAACTCGAGTGCAATCAGGGGTTTTCCAGTGAAGCAGCTCCGACCAGTTCAACCTGGTTCAGCTTGTCCATTAGAAGTTGCAGTACATGAGTTAGATATCTTGTTTACAGCCGAAACACATAATTTTCCATGTGCAGTGGCACCTTATCCTGGTGCAGAGACAGGTGCAGGAGGTCGTATTAGGGATACACATGCTACAGGAAGGGGGTCCTTTGTCCAAGCAGCTACAGCTGGTTATTGCGTTGGGAATCTCAACACACCAGGCTTTTATGCTCCATGGGAAGATTCCTCCTTTACTTATCCATCAAATTTGGCACCACCTTTACAGATTCTGATAGATTCTAGTAATGGTGCATCTGACTATGGGAACAAATTTGGAGAGCCATTGATCCAGGGTTTCTGTAGAACTTTTGGAATGAGACTTCCCAGTGGGGAGAGGCGAGAATGGTTGAAGCCTATCATGTTCAGCGCAGGCATTGGACAGATTGACCACCTTCATATATCAAAGGGAGAGCCTGACATTGGGATGCTGGTTGTTAAGATTGGAGGCCCGGCTTATCGTATTGGTATGGGAGGCGGGGCAGCCTCAAGCATGGTCAGTGGGCAGAATGATGCAGAGCTTGATTTCAATGCTGTGCAACGTGGGGATGCTGAGATGGCTCAAAAACTATATCGTCTTGTGCGTGCTTGTATTGAGATGGGGGATAAAAACCCAATTATCAGCATTCATGATCAGGGAGCTGGTGGGAATTGCAATGTTGTAAAGGAAATTATATATCCAAAGGGTGCTGAGATAGATGTTCGAGCAATTGTGGTTGGCGATCATACAATGTCTGTTCTAGAAATTTGGGGTGCAGAGTATCAGGAGCAGGATGCAATCTTGGTGAAGCCTGAAAGTCGTGATCTTCTGGAATCAATCTGTAACAGGGAGAAAGTTTCAATGGCTGTTATTGGAACTATCAGTGGTGATGGACGTGTTGTTTTAGTTGACAGTGTAGCAGTCCAGAAGTCTATTTCAAATGGACTCACTTCACCTCCCCCTGCCGTGGATCTTGAATTGGAGAAAGTCCTTGGTGACATGCCTAAGAAAACTTTTAAATTTAATCGGGTTGTTTATGAGAGGGAGCCACTTGATATTGCCCCTGGGATTGAAGTGATAGATTCCCTAAAGAGGGTATTGAGTTTACCGTCTGTTTGTTCAAAGCGCTTCTTAACAACAAAAGTTGATAGGTGTGTTACTGGTCTAGTGGCACAACAACAAACTGTTGGCCCTTTGCAGATTCCCATTGCTGATGTTGCTGTTACAGCTCAAACTTTTGTTGATGTGACTGGAGGTGCTTGTGCCATTGGTGAGCAACCCATCAAAGGCCTGTTAGACCCCAAAGCAATGGCTCGGTTGGCTGTTGGAGAAGCACTAACAAATCTTGTATGGGCAAAGGTCACTTCCCTTTCTGATGTCAAGGCTAGTGGTAACTGGATGTATGCTGCCAAGCTTGATGGGGAAGGAGCTGACATGTATGATGCAGCTATATCTCTATCTGAAGCAATGATTGAACTTGGCATTGCTATTGATGGAGGGAAAGACAGCCTTTCTATGGCAGCCCACGCTGAAAGTGAAGTTGTCAAGGCACCAGGAAATCTTGTCATCAGTGTTTATGTTACTTGTCCTGATATAACAAAAACAGTGACTCCAGATTTAAAACTCAAGGATGATGGTATTTTGCTTCATATTGATTTGTCAAAAGGTAAGAGGCGGTTAGGTGGATCTGCTCTTGCCCAGGCGTTTGACCAAGTTGGAGATGAGTGTCCTGATCTTGATGATGTTCCTTACCTTAAAAAGGCCTTTGAAGGTGTTCAAGACCTTCTTTCTGATGAATTGATATCTGCTGGTCATGACATCAGTGATGGTGGGCTGCTAGTTTGTGCCTTAGAGATGGCATTTGCTGGTAACTGTGGTCTTAGTTTGGACTTGGCGTCGCAAGGTACCAGCCTTTTCCAAACACTCTATGCTGAAGAGCTTGGGTTAGTTCTTGAGGTAAACAAGAAAAATCTGGCTTTGGTAATGGATAAATTGAGTAATGTGGGAGTTTCAGCTGAAATCATTGGTCAAGTAACAGCCAATCCATCAATAGAAGTTAAGGTTGATGGGGAGACTTATTTAACTGAAAAAACTAGTATCCTTAGGGACTTGTGGGAAGAGACCAGTTTTCAGCTGGAAAAGTTCCAAAGATTGGCATCTTGTGTGGATATGGAGAAAGAAGGACTAAAACATCGATATGAGCCCTCATGGGAATTGTCTTTTACTCCCACCTTCACTGATGGAAAGCTTCTGTCTGCAACTATAAAACCTAAAGTGGCTGTGATTAGAGAAGAAGGCAGTAATGGAGACAGAGAAATGGCTGCAGCATTTTATGCTGCTGGTTTTGAACCATGGGATATTACTATGTCAGACCTTCTTAATGGAAAGATCTCTTTGCAAGACTTCCGCGGAATTGTGTTTGTTGGTGGATTTAGCTATGCTGATGTGCTTGATTCTGCAAAAGGTTGGTCTGCTAGCATAAGATTCAATGAGTCCGTTTTACAACAATTTCAGGAGTTTTACAAGCGTCCAGACACTTTCAGTCTCGGTGTATGCAATGGATGTCAGCTAATGGCTTTGTTGGGATGGGTACCGGGTCCACAAGTTGGGGGTGTGCATGGTGCTGGCGGCGACCTATCACAACCGAGGTTCATTCATAATGAGTCAGGGCGGTTTGAGTGCCGCTTTACAAGTGTGACCATAAAGGACTCACCGGCTATAATGTTCAAAGACATGGCAGGTAGCACATTGGGTATATGGGCTGCTCATGGTGAGGGAAGAGCTTATTTCCCAGATGAAGGCGTGTTGGACCGTATAGTTCATTCTGAGTTGGCTCCTATAAGATACTGTGATGATGCTGGGAATCCAACAGAGGCCTACCCTTTCAATGTGAATGGCTCTCCTTTAGGGGTGGCAGCTATTTGTTCCCCAGATGGGAGGCATCTTGCCATGATGCCTCATCCTGAGCGTTGCTTCTTAATGTGGCAGTTCCCATGGTATCCAAAGCAGTGGGATGTGGAGAAGAAGGGGCCTAGTCCTTGGTTACGCATGTTCCAGAATGCAAGAGAGTGGTGTTCCTGA 4233 0.4493 MAAATEFGVSQFLQGTSRQTLFLKKKPQRQRRSMFWGALWNRNWALGSTHRALPLRCQAQENPRAVVSGGVSSSVEEQPALVEKPASEVVHLYRVPFMQASAAAELLKEAQVKISGQIVEIQTEQCYNVGLSSQLSGGKFSVLRWLLQETFEPENLGTESFLEKKKKEGLSPVIVEVGPRLSFTTAWSTNAVAICQACGLTEVNRLERSRRYLLFTTTELQDYQINDFTSMVHDRMTECVYVQKLTSFETSVVPEEIRYIPVMEKGRKALEEINLEMGFAFDDQDLEYYTKLFREDIKRNPTNVELFDIAQSNSEHSRHWFFTGNIFIDGQPVNRTLMQIVKSTLQANPNNSVIGFKDNSSAIRGFPVKQLRPVQPGSACPLEVAVHELDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLNTPGFYAPWEDSSFTYPSNLAPPLQILIDSSNGASDYGNKFGEPLIQGFCRTFGMRLPSGERREWLKPIMFSAGIGQIDHLHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRLVRACIEMGDKNPIISIHDQGAGGNCNVVKEIIYPKGAEIDVRAIVVGDHTMSVLEIWGAEYQEQDAILVKPESRDLLESICNREKVSMAVIGTISGDGRVVLVDSVAVQKSISNGLTSPPPAVDLELEKVLGDMPKKTFKFNRVVYEREPLDIAPGIEVIDSLKRVLSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPIADVAVTAQTFVDVTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGADMYDAAISLSEAMIELGIAIDGGKDSLSMAAHAESEVVKAPGNLVISVYVTCPDITKTVTPDLKLKDDGILLHIDLSKGKRRLGGSALAQAFDQVGDECPDLDDVPYLKKAFEGVQDLLSDELISAGHDISDGGLLVCALEMAFAGNCGLSLDLASQGTSLFQTLYAEELGLVLEVNKKNLALVMDKLSNVGVSAEIIGQVTANPSIEVKVDGETYLTEKTSILRDLWEETSFQLEKFQRLASCVDMEKEGLKHRYEPSWELSFTPTFTDGKLLSATIKPKVAVIREEGSNGDREMAAAFYAAGFEPWDITMSDLLNGKISLQDFRGIVFVGGFSYADVLDSAKGWSASIRFNESVLQQFQEFYKRPDTFSLGVCNGCQLMALLGWVPGPQVGGVHGAGGDLSQPRFIHNESGRFECRFTSVTIKDSPAIMFKDMAGSTLGIWAAHGEGRAYFPDEGVLDRIVHSELAPIRYCDDAGNPTEAYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYPKQWDVEKKGPSPWLRMFQNAREWCS* 1411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1300 1410 Pfam CobB/CobQ-like glutamine amidotransferase domain 1140 1409 - -
Gso13g1300 1410 SUPERFAMILY PurM N-terminal domain-like 740 921 IPR036921 -
Gso13g1300 1410 CDD GATase1_FGAR_AT 1143 1406 - -
Gso13g1300 1410 SUPERFAMILY PurM N-terminal domain-like 321 528 IPR036921 -
Gso13g1300 1410 PANTHER - 57 1409 - -
Gso13g1300 1410 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 253 313 - -
Gso13g1300 1410 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 57 1409 - -
Gso13g1300 1410 Gene3D - 729 913 IPR036921 -
Gso13g1300 1410 SUPERFAMILY Class I glutamine amidotransferase-like 1138 1409 IPR029062 -
Gso13g1300 1410 Gene3D - 520 697 IPR036676 -
Gso13g1300 1410 Gene3D - 915 1085 IPR036676 -
Gso13g1300 1410 CDD PurL_repeat2 789 1062 - -
Gso13g1300 1410 Gene3D - 1086 1410 IPR029062 -
Gso13g1300 1410 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 270 319 IPR041609 -
Gso13g1300 1410 SUPERFAMILY PurM C-terminal domain-like 927 1122 IPR036676 -
Gso13g1300 1410 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 89 1410 IPR010073 GO:0004642|GO:0006189
Gso13g1300 1410 Pfam AIR synthase related protein, C-terminal domain 533 686 IPR010918 -
Gso13g1300 1410 Pfam AIR synthase related protein, C-terminal domain 943 1072 IPR010918 -
Gso13g1300 1410 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 125 243 IPR040707 -
Gso13g1300 1410 SMART GATase_5_2 1140 1409 - -
Gso13g1300 1410 TIGRFAM FGAM_synt: phosphoribosylformylglycinamidine synthase 93 1408 IPR010073 GO:0004642|GO:0006189
Gso13g1300 1410 Gene3D - 314 519 IPR036921 -
Gso13g1300 1410 SUPERFAMILY PurM C-terminal domain-like 530 764 IPR036676 -
Gso13g1300 1410 SUPERFAMILY PurS-like 90 248 IPR036604 -
Gso13g1300 1410 CDD PurL_repeat1 305 688 - -
Gso13g1300 1410 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1142 1386 - -
Gso13g1300 1410 SUPERFAMILY FGAM synthase PurL, linker domain 253 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1300 Gso-Chr13 28401899 28406892 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1300 K01952 - gmx:100818572 2793.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0318 18 2921951 2926891 Gso13g1300 13 28401899 28406892 GST