Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1279 ATGAATGTAGACGCAGGAGTTGGCTGCCTCAGCGTTGAACACTGTTCCATGCTGTTAAAGCCTCCGTTCACACTCTCACACCGATTCAATTTCAGATTTTCCTGTCAAACTCGCATTTTCCGGGCACGAAACTCGAGGAATTCGCGCATGGCGCCTCCCATCCTCTCCCTCGCTCTTCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGGGGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAATTACTGGGATATGATGTGGATCCAATTAATTCTGTGCAGTTTTCGAATCATACAGGATACCCAACGTTTAAGGGTCAGGTTTTGAATGGACAGCAACTCTGGGATCTAATAGAAGGCCTTGAAGGAAATGATTTATTGTTCTATACTCACTTGTTAACAGGTTATATTGGTTCAGAGTCTTTTCTAAACACTGTATTGCAAGTTGTCAACAAACTTCGGTCAACAAACCCAGGTCTTACATATGTATGTGATCCAGTGATGGGTGATGAAGGAAAGCTTTATGTTCCTCAAGAGCTAGTATCAGTCTATCGTGAGAAGGTTGTCCCAGTAGCTTCAGTGTTGACTCCCAACCAGTTTGAGGCAGAACTACTGACAGGCTTCAGGATTCAGTCTGAAGGACATGGGCGGGAGGCCTGTAGGCTTCTCCATGCAGCTGGGCCTTCAAAGGTCATAATTACAAGTATAAATATAGACGGGATTCTTCTCCTCATTGGCAGTCATCAAAAAGAAAAGGGAGAGCCTCCCAGACAATTTAGGATCGTGATTCCAAAAATACCAGCTTATTTTACGGGAACGGGAGATCTCATGACTGCACTTCTTCTTGGTTGGAGCAATAAATACCCAGACAACCTTGAGATTGCTGCAGAACTTGCAGTGTCAAGCTTGCAGGCAGTTTTGCACAGGACACTTAGTGACTACAAAAGCGCTGGACATGATTCCGAGTCAACCAGTTTAGAGATTAGATTAATTCAAAGTCAGGATGATATTCGCACCCCACAAGTAAAACTTAAAGCTGAAATATACAGCTAA 1074 0.4432 MNVDAGVGCLSVEHCSMLLKPPFTLSHRFNFRFSCQTRIFRARNSRNSRMAPPILSLALPSNTGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGYPTFKGQVLNGQQLWDLIEGLEGNDLLFYTHLLTGYIGSESFLNTVLQVVNKLRSTNPGLTYVCDPVMGDEGKLYVPQELVSVYREKVVPVASVLTPNQFEAELLTGFRIQSEGHGREACRLLHAAGPSKVIITSINIDGILLLIGSHQKEKGEPPRQFRIVIPKIPAYFTGTGDLMTALLLGWSNKYPDNLEIAAELAVSSLQAVLHRTLSDYKSAGHDSESTSLEIRLIQSQDDIRTPQVKLKAEIYS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1279 357 TIGRFAM pyridox_kin: pyridoxal kinase 65 354 IPR004625 GO:0008478|GO:0009443
Gso13g1279 357 CDD pyridoxal_pyridoxamine_kinase 65 318 IPR004625 GO:0008478|GO:0009443
Gso13g1279 357 Pfam Phosphomethylpyrimidine kinase 141 245 IPR013749 -
Gso13g1279 357 Gene3D - 61 356 IPR029056 -
Gso13g1279 357 PANTHER PYRIDOXAL KINASE 54 353 IPR004625 GO:0008478|GO:0009443
Gso13g1279 357 SUPERFAMILY Ribokinase-like 64 353 IPR029056 -
Gso13g1279 357 PANTHER PYRIDOXAL KINASE 54 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1279 Gso-Chr13 28109954 28117158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1279 K00868 - gmx:100811288 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0338 18 3190295 3198149 Gso13g1279 13 28109954 28117158 GST