Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1277 ATGGGTGTAGTGAGGGGGGTGATATTGGATGAATCAGTACTCTTGGCTGAAAGTGATGATGATAAAACTGTATCTTTACTACGACCAGGAGCTGAGTCTCTCATCCAAACACTCGTTCTATCCAGAACGCATAGTGGAATTGCTCATGGTGTTGGCCTTCCAGATGACAAGGTGAGTGTTCTTAAAAAATTTGCTAGTTTGAACTCACTTGATTGCTTTATCTTAAATGATCATGTAAGTGAGGTTATGGCTGGATGGAGTAATGCTGATGATGGCAGTGTTATTATTTATCTGATTTCTAATAAGAAGGAGTTCTTACCTAAATTAAGCAGCTATAATTGGCTGGTTGTTGTTCTGAATGTTGGAGGTGAAAGTTCATGTCACACTCCAAATATACTTCAGATTGAAAACTTAGAGGAGTTGCCATTGACCATATGCCACTTAAATAAAAGATCAATTGGAACCAATGCTGTGACTGTGGGTTATACAATGAAGCCTTCTCGTGTCGAAGATTTTGCAAAGAGGGGTGCATTTCCTTTGTGTCCTACTCAAAATGGGTTGATGTTTGTTCCTCTCACATCCAAGCTTCCATTATCATCTCAGTTAAAGGATGTTGACATAGTTCTTCACAAAGCCACCGATGAAATATTATCTGTTGAAGATAATAAAATTACTTTTACACAGAACATGCAAGCATTGCAAAGATACTTGGATCAGCACCAGGATTTCTGTGTTATTGATCCACTGAGTAACGTTTATCCTTTATTGGACAGGCTAGAAATTCAACAATTTCTACTTGGCTTGGTGGAACTGAACACTGAAGGGAAATATTTGATCAGAGGGGCCCATTTTCTTAAGGTTGATAACTTTGATGAATTTGATTTTGCAACTGGACTAGCTGAAGCTAGATTGTCTCTTCCATGTATAGTGAAACCTAAGGTTGCTTGTGGTGTCAGTGATGCACACAAGATGGCAATTGTTTTCAGAGTCGATGATTTTAAGAATTTAAGTGTTCCTCTTCCAAATGTTATTCAGGAATATGTGGATCACTCATCCACTTTGTACAAATTTTATGTCTTGGGTGAAAAGATTTTCCATGCTGTCAAGAAGTCAATACCAAATGCTGATATTTTGAGGAAATCATCTGATGGTGATGAGCTCAAACCTCTACTGTTTGATAGCTTGAAATCTATGCCGACCGCTGACAGTATCACAAGTAATGTGTCCATTGACCTTAAGCTGGTTACAGATGCTGCAAATTGGCTTAGGAGAAGGCTTCAGCTTACCATCTTTGGTTTTGATGTTGTAATTCAGGAAGGTACTCATGACCATGTTATTGTGGATGTAAACTATCTCCCATCATTTAAGGAAGTGCCTGATGACATCTCTATTCCTGCCTTTTGGGATGCCATTAGAAATAAGTTTGACTCTAGGGTGCCTAAATAA 1446 0.3852 MGVVRGVILDESVLLAESDDDKTVSLLRPGAESLIQTLVLSRTHSGIAHGVGLPDDKVSVLKKFASLNSLDCFILNDHVSEVMAGWSNADDGSVIIYLISNKKEFLPKLSSYNWLVVVLNVGGESSCHTPNILQIENLEELPLTICHLNKRSIGTNAVTVGYTMKPSRVEDFAKRGAFPLCPTQNGLMFVPLTSKLPLSSQLKDVDIVLHKATDEILSVEDNKITFTQNMQALQRYLDQHQDFCVIDPLSNVYPLLDRLEIQQFLLGLVELNTEGKYLIRGAHFLKVDNFDEFDFATGLAEARLSLPCIVKPKVACGVSDAHKMAIVFRVDDFKNLSVPLPNVIQEYVDHSSTLYKFYVLGEKIFHAVKKSIPNADILRKSSDGDELKPLLFDSLKSMPTADSITSNVSIDLKLVTDAANWLRRRLQLTIFGFDVVIQEGTHDHVIVDVNYLPSFKEVPDDISIPAFWDAIRNKFDSRVPK* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1277 481 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 160 250 IPR041429 -
Gso13g1277 481 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 294 460 IPR040464 -
Gso13g1277 481 Gene3D - 146 270 - -
Gso13g1277 481 PIRSF ITPK_unchar_domain 1 481 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Gso13g1277 481 PANTHER INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE 4 21 479 - -
Gso13g1277 481 Gene3D - 289 387 - -
Gso13g1277 481 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 21 479 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1277 Gso-Chr13 28083426 28087055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1277 K01765 - gmx:100810742 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0340 18 3209111 3212211 Gso13g1277 13 28083426 28087055 GST