Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1252 ATGGAGGAGAACGATGCAGAAGAAGCGAAGCGATTGATGCTGAAAATCGCCGCAATTCTCGACGAGGCTCGAACCTCATACGCCACTCACAACCGAAAGCTCAAGGAATTCTCGCTTCTCCGATCCAAATCCTCTTCTCATTCGCACTTCTTCTCCGCCTTCTCTAAAACCCTAACTCCTCTCTTCGACTTTCAGAGGCGCCTTGCTTCCGCCGACCGCGTTGTTTTCTTCGTCTCCGCCTTCGCCGTCGCCACCACCGCTGCTGCTTCCGATGAGTTCCTCGACCACTTCCTCAAGTTCCTCCTCGCTGCCGCCACGGCATCAAACAAAACCGCCAGGTTCCGAGCCTGCCAGATCGTCTCTGAGATAATATTGCGGCTACCGGATGATGCTGAAGTTAGCAATGAGATATGGGATGAGGTGATAGAGTGGATGAAGGTGAGGGTGCGAGACAAGATCCCTGTGGTGCGTACTTTTGCGGTTAGAGCGCTTTCGCGCTTCGTGAATGACTCTGTGAATAGTGACATCCTTGATTTGTTCCTCGAGGTGCTTCCTTTGGAGCAGAATGCGGATGTTCGCAAGATGATTGTTTTATCTTTGCCTCCTTCTAGTGCAACCTCTCAAGTTATCATTGATTGTACCTTGGATGTGAGTGAATCTGTACGCAAAGCAGCATACTGTGTTCTAGCTAATAAATTTCCTCTTCAAAGCTTAAGCATTAAACTCAGGACAGTAATTCTTCGGAGAGGACTTGCTGACCGGTCTGTTGCTGTCTCAAAAGAATGTTTTAAACTATTGAAAGATGAATGGCTCATGAAGTGTTGTAATGGTGATACTATAGAACTTTTGAAGTATCTTGATGTTGAAACCTATGAATCAGTTAGTGAATCTGTAATGGAGGCGCTTCTTAAAGCTGGTTTGGTAAAACTACAGAATGGTGCAAGTATCCAGCAGTACATATCATCAAATGGTGACAGAACAGAAGGGGATGCGGTTCATTGCCCACCAAGCATTCATCCGATGGAAGCAGAGGCTGCTCTTTATTGGAGAACTGTTTGCAAGCATTTACAGTCAGAAGCACATGCCAAAGGCTCTGATGCTGCAGCAACAATGGGTACTGAAGCAGAAGTATATGCAGCAGAAGCATCAGATAAAAATGACCTTCTAGAAAAAATTCTTCCTGCAACAGTTGGTGAATATATAGAATTGGTCAGAGCTCATACTAATGCTGGATCAAACCATCGCTTTGCATGCCGGCAGCTGCTTTTGCTTGGTTGCATGTTTGATTTTTCTGATGTTACAAATAGAAAGACTGCTGGTGCATTTCTGCATGAGCTTATGTGCAAGCCTCCTGAGCATGAGGATGATGATGAAGGGAATATAGTTGTTCTTGGAGATGGATTAAGTTTTGGTGGGGACAATGATTGGGCTGAAGCTGTAGCCAGTTTAGCAAGGAAAGTCCATGCTGCTCCTGGTGAATTTGAAGAAGTTATTCTGGCAATAATAGAAGAGCTCGCCCAACCTTGCAGGGAGAGAACAGCAGATTATGTGCAGTGGATGCACAGCCTCTCTCTTACTGGCCTTTTGCTTAAAAATGCAAAATCACTTCGCTTTCTTCAGGGCAAGGCTATTGAACCTGATGAGCTACTCCAATCTTTACTACTACCGGGGGCAAAACAATCTCATTTGGATGTGCAAAGGATTGCAATCAGATGCCTTGGCCTTTTTGGCCTTTTGGAAAGGAAACCAAGTGCAGAACTTTTGAAACAGTTGAGGATTTCATATATTAAGGGGCCGCATTCAATCAGTATAGAGGCTTGTAAGGCATTAATTGATCTCGTGATGTGGTATGGTCCTCAAGAAGTTGACAAGATGTTAAACCTCAGTATTCCATGCCAATTAAACAGTGAGAAGACGACTTTTTCTCCTCTGAACTTTTCTGATTCAGAAGAGGAATTAGATGTTGGGACGCTTGATATCTTATATGGCGGCTTTGAAAATGATGACTGGGCGAGTCCTTTACCTAGCAACGAAGATGAGTGCGTTCATGCTATTCTTGGAGAGGGGTTTGCCAAAATTCTTCTCTTAAGTGACAACTATCCAAGCATACCAGCTTCTTTGCATCCTGTTATTTTATCAAAGCTCATTTACTTGTATTTCACTGACGTGTCGGAACACTTGCACAGATTGAAGCAATGCTTATCTGTTTTCTTCGAGCTTTACCCATGTCTCTCAGCCAATCATAAGAGGTGCATAACGAAAAGTTTCATTCCAGCAATGCGTTCAATGTGGCCAGGAATTTTTGGCAATTCTGCGGGTTCTACTTTTATGGTGTCGCAGATGCGTAAGCGTGCTGTTCAAGCTTCCCGTTTTATGCTGCAGATGGTGCAGATTCCCTTATACGTTAAAGAGACTCAACCAGATTGTGAAAATACTAGCACGGAACATCCACAAGTCATAGATAGTTGTGTGGAAGTTCCATTTGAATGTGGTGAGGAGGGGCTCGCACTACGCTTAGCCGTAGAGGTGGCAAGCTTTCAATCGAAGAAGACAGCAGCTGAGAAGGCATATGTGTCGGCTTTATGTAGAATACTTGTTTTGCTTCAGTTTCGGATATCAGAACAAGGACCAATAAAATTTATGAGGAGGCTTTTATGTCGCGTGCTAGAATGTGCATCTTCAGAGAAAGATATTGTTAAGGAATTGAAACGCATGTCTGAACGTCTCATGACAGTAGATAATCAACCAGATCAGGAATTGATGCAAGATGAAGTTAATCTTATTTTGGGGAAATTGGAACTTGATTGCGACCTGGATTTGAATGGTTCTGTTTCAATGCCACAAACACCAGCTGCACCCCCAACTAGGCCAACACGTTCCAGGAGAAGGGTAAGGATTGAGGAAGAAAGTTCTGATGAAGATTCACCTTCTGCAGTTCCTACCACCCATCATTCTGTAATAAGTCGCTCACAGAGAGCAAGCAAAACGGCAGCAATGAACAAGATGTCTTCTGCCACTAGATCGCTCAAAATTGATGAAATGGAAGAACTCGAGGAAGAAGAGTCTGATGTAACATCAGAAGCTTCTGATGCATTCGATTAG 3102 0.4397 MEENDAEEAKRLMLKIAAILDEARTSYATHNRKLKEFSLLRSKSSSHSHFFSAFSKTLTPLFDFQRRLASADRVVFFVSAFAVATTAAASDEFLDHFLKFLLAAATASNKTARFRACQIVSEIILRLPDDAEVSNEIWDEVIEWMKVRVRDKIPVVRTFAVRALSRFVNDSVNSDILDLFLEVLPLEQNADVRKMIVLSLPPSSATSQVIIDCTLDVSESVRKAAYCVLANKFPLQSLSIKLRTVILRRGLADRSVAVSKECFKLLKDEWLMKCCNGDTIELLKYLDVETYESVSESVMEALLKAGLVKLQNGASIQQYISSNGDRTEGDAVHCPPSIHPMEAEAALYWRTVCKHLQSEAHAKGSDAAATMGTEAEVYAAEASDKNDLLEKILPATVGEYIELVRAHTNAGSNHRFACRQLLLLGCMFDFSDVTNRKTAGAFLHELMCKPPEHEDDDEGNIVVLGDGLSFGGDNDWAEAVASLARKVHAAPGEFEEVILAIIEELAQPCRERTADYVQWMHSLSLTGLLLKNAKSLRFLQGKAIEPDELLQSLLLPGAKQSHLDVQRIAIRCLGLFGLLERKPSAELLKQLRISYIKGPHSISIEACKALIDLVMWYGPQEVDKMLNLSIPCQLNSEKTTFSPLNFSDSEEELDVGTLDILYGGFENDDWASPLPSNEDECVHAILGEGFAKILLLSDNYPSIPASLHPVILSKLIYLYFTDVSEHLHRLKQCLSVFFELYPCLSANHKRCITKSFIPAMRSMWPGIFGNSAGSTFMVSQMRKRAVQASRFMLQMVQIPLYVKETQPDCENTSTEHPQVIDSCVEVPFECGEEGLALRLAVEVASFQSKKTAAEKAYVSALCRILVLLQFRISEQGPIKFMRRLLCRVLECASSEKDIVKELKRMSERLMTVDNQPDQELMQDEVNLILGKLELDCDLDLNGSVSMPQTPAAPPTRPTRSRRRVRIEEESSDEDSPSAVPTTHHSVISRSQRASKTAAMNKMSSATRSLKIDEMEELEEEESDVTSEASDAFD* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1252 1033 SUPERFAMILY ARM repeat 64 630 IPR016024 -
Gso13g1252 1033 MobiDBLite consensus disorder prediction 975 1007 - -
Gso13g1252 1033 MobiDBLite consensus disorder prediction 941 1033 - -
Gso13g1252 1033 Gene3D - 62 238 IPR011989 -
Gso13g1252 1033 Pfam Nuclear condensing complex subunits, C-term domain 522 870 IPR025977 -
Gso13g1252 1033 PANTHER CONDENSIN COMPLEX SUBUNIT 3 7 1019 - -
Gso13g1252 1033 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 7 1019 IPR027165 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1252 Gso-Chr13 27699929 27707175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1252 K06678 - gmx:100817677 1894.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0363 18 3508912 3517158 Gso13g1252 13 27699929 27707175 GST