Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1246 ATGGGGTTGGGTTTGTTAGCTTCGAAGGCCATAAGACCCACCTCAAGGCTCCTCCTCGGTTCCCAAAACCCTACCACTTTTCTCCTCCGAACCATCGTCTCCAAGCCTGAGCTTCAGAATCCCGAAGCCAGCGCCGCACAGCCGGAGCAGCCGCCGGCGCCCGATCTCCCGCCGCGGACTCCGCTCGCCGGCGCCCGCGTCCACTTCTCGAACCCCGAGGACGCCATCGAGGTGTTCGTGGATGGCTACCCCGTGAAAATCCCGAAAGGAATGACCGTTCTTCAGGCCTGCGAGGTCGCCGGCGTCGACATCCCGAGGTTCTGCTACCACAGCAGACTCTCCATCGCCGGAAACTGCCGCATGTGCCTCGTCGAGGTCGAGAAATCGCCCAAACCTGTCGCCTCTTGCGCCATGCCCGCTCTCCCTGGGATGAAAATTAAGACTGACACACCTGTGGCAAAGAAGGCTCGAGAAGGAGTGATGGAGTTTTTATTGATGAATCATCCATTAGATTGCCCAATTTGTGATCAGGGTGGGGAATGTGATCTTCAGGATCAGTCAATGGCATTTGGCTCTGATCGTGGGCGGTTCACTGAAGTGAAGAGATCTGTGGTAGATAAAAATCTTGGACCTCTGGTGAAGACTGTGATGACTCGGTGCATTCAATGTACAAGGTGTGTTAGATTTGCAACAGAGGTTGCTGGGGTTCAGGATCTTGGCATGTTAGGTCGTGGCAGTGGAGAGGAGATTGGAACATATGTTGAAAAACTTTTGACAAGTGAGCTTTCTGGAAATGTCATAGATATCTGTCCCGTGGGAGCTCTCACGTCAAAACCTTTTGCATTTAAAGCCCGGAATTGGGAGTTGAAGGGCACAGAGACCATTGATGTTACTGATGCAGTTGGATCCAATATTCGAATTGATAGCAGAGGACCTGAAGTGATGCGCATTGTTCCTCGTTTAAATGAGGACATAAATGAAGAATGGATTTCAGACAAAACCCGCTTTTGTTATGATGGTTTGAAAAGGCAGAGGTTAAATGACCCCATGATTCGTGGTTCTGATGGACGCTTTAAGCCTGTTAACTGGCGTGATGCTCTTGCTGTGGTAGCAGAGGTTGCCCACCAAGTCAAACCGGAAGAAATTGTTGGCATAGCTGGCAAACTTTCTGATGCTGAGTCCATGATTGCACTAAAAGATTTCATAAATAGGATGGGGTCAAATGATGTATGGGGTGAAGGCATTGGTGTAAATACTAATGCTGATTTCAGATCAGGATATATTATGAATACTAGCATTGCTGGTCTTGAAAAAGCGGATGCGTTCCTGTTGGTTGGCTCCCAGCCACGGGTGGAAGCTGCCATGGTTAATGCCAGAATACGCAAAACTGTCAGAGCAAACCAAGCCAAAGTTGGGTACATTGGGCCTGCCACTGATTTCAACTACGATCACCAACATCTTGGTACTGGCCCTCAAACACTCCTTGAAATTGCTGAGGGTCGCCACCCATTTTTCAAGACACTCTCAAATGCCAAAAACCCTGTTATCATTGTCGGTGCTGGGGTTTTTGAGAGGAAGGATCAGGATGCAATTTTTGCTGCTGTTGAAACCATTGCACAAAAAGCAAATGTTGTCAGACCTGACTGGAATGGCCTTAATGTATTGCTTCTCCATGCTGCCCAGGCTGCTGCGCTTGACCTTGGACTTGTTCCACAATCTGAGAAAAGCCTTGAGTCTGCAAAATTTGTATATTTGATGGGTGCTGATGATGTTAACTTAGACAAGATCCCAGATGATGCTTTTGTTGTTTATCAAGGTCACCACGGTGACAAGAGTGTTTATCGGGCAAATGTTGTTTTGCCAGCAGCAGCATTCAGTGAGAAGGAAGGGACCTATGAAAATACCGATGGTTTCTCACAACAAACATTGCCTGCAGTTCCAACAGTTGGTGACTCCAGAGATGATTGGAAGATAATTCGAGCTCTATCTGAGGTGGCAGGAGTGCGTTTGCCCTATGATACAATTGGGGCCGTTCGTGCTCGAATCAGTACTGTAGCCCCAAACCTTGTGAAAATGGATGAGAGAGAGCCTGCCACATTACCATCTTCACTCAGACCAACCTTCTCTGAGAAGGTGGACACCACCCCATTCGGGACTGTAGTTGAGAATTTCTATATGACTGATGCCATTACAAGGGCATCAAAGATAATGGCACAATGCAGTGCCATGCTGTTGAAGAAGTGA 2244 0.4826 MGLGLLASKAIRPTSRLLLGSQNPTTFLLRTIVSKPELQNPEASAAQPEQPPAPDLPPRTPLAGARVHFSNPEDAIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPVAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEVKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVEKLLTSELSGNVIDICPVGALTSKPFAFKARNWELKGTETIDVTDAVGSNIRIDSRGPEVMRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGSDGRFKPVNWRDALAVVAEVAHQVKPEEIVGIAGKLSDAESMIALKDFINRMGSNDVWGEGIGVNTNADFRSGYIMNTSIAGLEKADAFLLVGSQPRVEAAMVNARIRKTVRANQAKVGYIGPATDFNYDHQHLGTGPQTLLEIAEGRHPFFKTLSNAKNPVIIVGAGVFERKDQDAIFAAVETIAQKANVVRPDWNGLNVLLLHAAQAAALDLGLVPQSEKSLESAKFVYLMGADDVNLDKIPDDAFVVYQGHHGDKSVYRANVVLPAAAFSEKEGTYENTDGFSQQTLPAVPTVGDSRDDWKIIRALSEVAGVRLPYDTIGAVRARISTVAPNLVKMDEREPATLPSSLRPTFSEKVDTTPFGTVVENFYMTDAITRASKIMAQCSAMLLKK* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1246 747 SUPERFAMILY 2Fe-2S ferredoxin-like 76 148 IPR036010 GO:0051536
Gso13g1246 747 ProSiteProfiles Prokaryotic molybdopterin oxidoreductases 4Fe-4S domain profile. 289 345 IPR006963 GO:0016491
Gso13g1246 747 SUPERFAMILY Formate dehydrogenase/DMSO reductase, domains 1-3 287 694 - -
Gso13g1246 747 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 219 229 IPR000283 GO:0008137|GO:0016020|GO:0042773
Gso13g1246 747 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 172 184 IPR000283 GO:0008137|GO:0016020|GO:0042773
Gso13g1246 747 MobiDBLite consensus disorder prediction 39 64 - -
Gso13g1246 747 Pfam Molybdopterin oxidoreductase 345 664 IPR006656 GO:0016491
Gso13g1246 747 CDD fer2 76 147 IPR001041 GO:0051536
Gso13g1246 747 Gene3D - 580 697 - -
Gso13g1246 747 ProSiteProfiles His(Cys)3-ligated-type [4Fe-4S] domain profile. 152 191 IPR019574 GO:0016491
Gso13g1246 747 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 53 709 - -
Gso13g1246 747 Pfam NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 157 194 IPR019574 GO:0016491
Gso13g1246 747 Pfam NADH-ubiquinone oxidoreductase subunit G, C-terminal 709 740 IPR015405 GO:0016651|GO:0051536
Gso13g1246 747 SMART NADH_G_4Fe_4S_3_2 157 197 IPR019574 GO:0016491
Gso13g1246 747 CDD MopB_Res-Cmplx1_Nad11 293 666 - -
Gso13g1246 747 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 74 152 IPR001041 GO:0051536
Gso13g1246 747 Gene3D - 75 197 - -
Gso13g1246 747 TIGRFAM NuoG: NADH dehydrogenase (quinone), G subunit 78 662 IPR010228 GO:0016651|GO:0051536
Gso13g1246 747 Pfam 2Fe-2S iron-sulfur cluster binding domain 74 151 - -
Gso13g1246 747 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 75 KDA SUBUNIT, MITOCHONDRIAL 53 709 - -
Gso13g1246 747 ProSitePatterns Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 105 122 IPR000283 GO:0008137|GO:0016020|GO:0042773
Gso13g1246 747 Gene3D - 280 395 - -
Gso13g1246 747 SUPERFAMILY 4Fe-4S ferredoxins 149 285 - -
Gso13g1246 747 Gene3D - 201 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1246 Gso-Chr13 27597230 27603395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1246 K03934 - gmx:100802040 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0368 18 3598373 3603838 Gso13g1246 13 27597230 27603395 GST